RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 C12orf65Q9H3J6 166 aaKnown RBP21.47■■□□□ 1.03
RHBDD3-206ENST00000493894 CLCF1Q9UBD9 225 aa21.47■■□□□ 1.03
RHBDD3-206ENST00000493894 MRTO4Q9UKD2 239 aaKnown RBP21.47■■□□□ 1.03
RHBDD3-206ENST00000493894 EDARQ9UNE0 448 aa21.47■■□□□ 1.03
RHBDD3-206ENST00000493894 ABCG2Q9UNQ0 655 aa21.47■■□□□ 1.03
RHBDD3-206ENST00000493894 SEC22BO75396 215 aa21.46■■□□□ 1.03
RHBDD3-206ENST00000493894 KRT4P19013 534 aa21.46■■□□□ 1.03
RHBDD3-206ENST00000493894 PRPH2P23942 346 aa21.46■■□□□ 1.03
RHBDD3-206ENST00000493894 CPA2P48052 419 aa21.46■■□□□ 1.03
RHBDD3-206ENST00000493894 CLDN18P56856 261 aa21.46■■□□□ 1.03
RHBDD3-206ENST00000493894 FOXF2Q12947 444 aa21.46■■□□□ 1.03
RHBDD3-206ENST00000493894 FBXW10Q5XX13 1052 aa21.46■■□□□ 1.03
RHBDD3-206ENST00000493894 GRAMD2AQ8IUY3 354 aa21.46■■□□□ 1.03
RHBDD3-206ENST00000493894 GCNT2Q8N0V5 402 aa21.46■■□□□ 1.03
RHBDD3-206ENST00000493894 C4orf33Q8N1A6 199 aa21.46■■□□□ 1.03
RHBDD3-206ENST00000493894 INTS12Q96CB8 462 aaKnown RBP21.46■■□□□ 1.03
RHBDD3-206ENST00000493894 ELP4Q96EB1 424 aa21.46■■□□□ 1.03
RHBDD3-206ENST00000493894 G6PC3Q9BUM1 346 aa21.46■■□□□ 1.03
RHBDD3-206ENST00000493894 SDHAF3Q9NRP4 125 aa21.46■■□□□ 1.03
RHBDD3-206ENST00000493894 ST6GALNAC2Q9UJ37 374 aa21.46■■□□□ 1.03
RHBDD3-206ENST00000493894 SLC28A1O00337 649 aa21.45■■□□□ 1.02
RHBDD3-206ENST00000493894 RGS14O43566 566 aa21.45■■□□□ 1.02
RHBDD3-206ENST00000493894 IFI6P09912 130 aa21.45■■□□□ 1.02
RHBDD3-206ENST00000493894 PSMD4P55036 377 aaKnown RBP21.45■■□□□ 1.02
RHBDD3-206ENST00000493894 DAZAP2Q15038 168 aaPredicted RBP21.45■■□□□ 1.02
RHBDD3-206ENST00000493894 CDC20BQ86Y33 519 aa21.45■■□□□ 1.02
RHBDD3-206ENST00000493894 FOXC2Q99958 501 aa21.45■■□□□ 1.02
RHBDD3-206ENST00000493894 RBM24Q9BX46 236 aaKnown RBP21.45■■□□□ 1.02
RHBDD3-206ENST00000493894 LRTM1Q9HBL6 345 aa21.45■■□□□ 1.02
RHBDD3-206ENST00000493894 CCM2LQ9NUG4 571 aaPredicted RBP21.45■■□□□ 1.02
RHBDD3-206ENST00000493894 C1orf109Q9NX04 203 aa21.45■■□□□ 1.02
RHBDD3-206ENST00000493894 CCL27Q9Y4X3 112 aa21.45■■□□□ 1.02
RHBDD3-206ENST00000493894 PTGDR2Q9Y5Y4 395 aa21.45■■□□□ 1.02
RHBDD3-206ENST00000493894 C17orf51A8MQB3 221 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 B4DXG7 233 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 NPIPB8E9PQR5 432 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 PDPK1O15530 556 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 ZIC3O60481 467 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 EPXP11678 715 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 NEFHP12036 1026 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 CLK3P49761 638 aaKnown RBP21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 EEF1A1P68104 462 aaKnown RBP21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 HSPB3Q12988 150 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 STX5Q13190 355 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 GAB1Q13480 694 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 GANABQ14697 944 aaKnown RBP21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 KIAA0040Q15053 153 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 EEF1A1P5Q5VTE0 462 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 RAET1LQ5VY80 246 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 PLXDC2Q6UX71 529 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 LUZP2Q86TE4 346 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 FADS6Q8N9I5 356 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 OR2M3Q8NG83 312 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 EGLN2Q96KS0 407 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 CCT7Q99832 543 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 LMF2Q9BU23 707 aaKnown RBP21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 IQCGQ9H095 443 aaKnown RBP21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 PIGMQ9H3S5 423 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 DSN1Q9H410 356 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 FAM120CQ9NX05 1096 aaKnown RBP21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 FIS1Q9Y3D6 152 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 MED13LQ71F56 2210 aa21.44■■□□□ 1.02
RHBDD3-206ENST00000493894 TTC36A6NLP5 189 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 AZIN1O14977 448 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 HCRTR2O43614 444 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 FADS1O60427 444 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 IL33O95760 270 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 CHEK2O96017 543 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 PEPDP12955 493 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 HK1P19367 917 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 GPC1P35052 558 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 RFX3P48380 749 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 DIO3P55073 304 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 PCLAFQ15004 111 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 BCL2A1Q16548 175 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 CHMP1BQ7LBR1 199 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 P4HA3Q7Z4N8 544 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 C10orf107Q8IVU9 208 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 LINC01560Q8TB33 94 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 GFM2Q969S9 779 aaKnown RBP21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 ZNF764Q96H86 408 aaPredicted RBP21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 TRMOQ9BU70 441 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 LIME1Q9H400 295 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 PTGES2Q9H7Z7 377 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 C3orf14Q9HBI5 128 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 GALNT8Q9NY28 637 aa21.43■■□□□ 1.02
RHBDD3-206ENST00000493894 GOSR1O95249 250 aa21.42■■□□□ 1.02
RHBDD3-206ENST00000493894 DNASE1P24855 282 aa21.42■■□□□ 1.02
RHBDD3-206ENST00000493894 B3GALT5-AS1P59052 145 aa21.42■■□□□ 1.02
RHBDD3-206ENST00000493894 SLC18A2Q05940 514 aa21.42■■□□□ 1.02
RHBDD3-206ENST00000493894 ANKRD26P1Q6NSI1 321 aa21.42■■□□□ 1.02
RHBDD3-206ENST00000493894 RNF165Q6ZSG1 346 aa21.42■■□□□ 1.02
RHBDD3-206ENST00000493894 ZNF551Q7Z340 670 aaPredicted RBP21.42■■□□□ 1.02
RHBDD3-206ENST00000493894 UBQLNLQ8IYU4 475 aa21.42■■□□□ 1.02
RHBDD3-206ENST00000493894 MEIOBQ8N635 442 aa21.42■■□□□ 1.02
RHBDD3-206ENST00000493894 ZFP28Q8NHY6 868 aa21.42■■□□□ 1.02
RHBDD3-206ENST00000493894 PPCDCQ96CD2 204 aa21.42■■□□□ 1.02
RHBDD3-206ENST00000493894 GATA5Q9BWX5 397 aaPredicted RBP21.42■■□□□ 1.02
RHBDD3-206ENST00000493894 CXXC4Q9H2H0 198 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms