RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 TRMT5Q32P41 509 aaKnown RBP11.25□□□□□ -0.61
UPF3A-210ENST00000493727 PAGE3Q5JUK9 113 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 ZBTB37Q5TC79 503 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 LINC00696Q6ZRV3 163 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 ZNF621Q6ZSS3 439 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 ZNF551Q7Z340 670 aaPredicted RBP11.25□□□□□ -0.61
UPF3A-210ENST00000493727 ZAR1Q86SH2 424 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 ST13P4Q8IZP2 240 aaPredicted RBP11.25□□□□□ -0.61
UPF3A-210ENST00000493727 TRIML2Q8N7C3 387 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 GTF2H4Q92759 462 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 HAS2Q92819 552 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 MAGED4Q96JG8 741 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 ZNF681Q96N22 645 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 AMDHD1Q96NU7 426 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 INPP5KQ9BT40 448 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 RNF32Q9H0A6 362 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 OLAHQ9NV23 265 aa11.25□□□□□ -0.61
UPF3A-210ENST00000493727 LOC102723996A0A087X1L8 192 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 IGHV1-45A0A0A0MS14 117 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 ERICH4A6NGS2 130 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 A8MUA0 341 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 HNRNPCL1O60812 293 aaKnown RBP11.24□□□□□ -0.61
UPF3A-210ENST00000493727 ERN1O75460 977 aaKnown RBP11.24□□□□□ -0.61
UPF3A-210ENST00000493727 GSNP06396 782 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 PTGER1P34995 402 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 CHI3L1P36222 383 aaPredicted RBP11.24□□□□□ -0.61
UPF3A-210ENST00000493727 FRKP42685 505 aaPredicted RBP11.24□□□□□ -0.61
UPF3A-210ENST00000493727 STT3AP46977 705 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 TRPC1P48995 793 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 CDK9P50750 372 aaKnown RBP11.24□□□□□ -0.61
UPF3A-210ENST00000493727 OR4D2P58180 307 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 HBA1P69905 142 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 IGLV3-21P80748 117 aaPredicted RBP11.24□□□□□ -0.61
UPF3A-210ENST00000493727 DUSP2Q05923 314 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 MLC1Q15049 377 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 LTB4RQ15722 352 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 CEBPEQ15744 281 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 ZSCAN26Q16670 478 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 WIPI1Q5MNZ9 446 aaPredicted RBP11.24□□□□□ -0.61
UPF3A-210ENST00000493727 TMEM107Q6UX40 140 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 ANGPTL8Q6UXH0 198 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 PLPP5Q8NEB5 264 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 ADCY4Q8NFM4 1077 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 OR1N1Q8NGS0 311 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 DNAJB8Q8NHS0 232 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 SUN3Q8TAQ9 357 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 BRIX1Q8TDN6 353 aaKnown RBP11.24□□□□□ -0.61
UPF3A-210ENST00000493727 KAT2AQ92830 837 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 RIT1Q92963 219 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 PPWD1Q96BP3 646 aaKnown RBP11.24□□□□□ -0.61
UPF3A-210ENST00000493727 ROPN1LQ96C74 230 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 C8orf44Q96CB5 159 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 SLX1AQ9BQ83 275 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 ZNF700Q9H0M5 742 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 ADAP2Q9NPF8 381 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 SLC52A3Q9NQ40 469 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 NDE1Q9NXR1 346 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 TAS2R9Q9NYW1 312 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 PTGFRNQ9P2B2 879 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 TEKT2Q9UIF3 430 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 OSGIN2Q9Y236 505 aa11.24□□□□□ -0.61
UPF3A-210ENST00000493727 CACNA1CQ13936 2221 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 IGKV3D-11A0A0A0MRZ8 115 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 RNF103-CHMP3A0A140T963 221 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 TCRBV16S1A1N1A0A5B0 115 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 B2RBV5 119 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 C17orf105B2RV13 164 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 LRRTM2O43300 516 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 SCN2BO60939 215 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 SLITRK5O94991 958 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 UNC5CO95185 931 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 CRYABP02511 175 aaKnown RBP11.23□□□□□ -0.61
UPF3A-210ENST00000493727 ATP1B1P05026 303 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 KRT16P08779 473 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 STSP08842 583 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 MC3RP41968 323 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 CDKN2CP42773 168 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 TNFSF10P50591 281 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 RASSF2P50749 326 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 PRR5P85299 388 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 EEF1A2Q05639 463 aaKnown RBP11.23□□□□□ -0.61
UPF3A-210ENST00000493727 BNIP1Q12981 228 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 CAPRIN1Q14444 709 aaKnown RBP11.23□□□□□ -0.61
UPF3A-210ENST00000493727 ELAVL1Q15717 326 aaKnown RBP11.23□□□□□ -0.61
UPF3A-210ENST00000493727 GTDC1Q4AE62 458 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 ABHD17BQ5VST6 288 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 TMEM205Q6UW68 189 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 C16orf89Q6UX73 402 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 LANCL3Q6ZV70 420 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 DPP10Q8N608 796 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 OR5AK3PQ8NH89 298 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 DOK4Q8TEW6 326 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 PSMF1Q92530 271 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 CNPPD1Q9BV87 410 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 PAIP1Q9H074 479 aaKnown RBP11.23□□□□□ -0.61
UPF3A-210ENST00000493727 CXorf36Q9H7Y0 433 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 C3orf14Q9HBI5 128 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 SERHLQ9NQF3 203 aa11.23□□□□□ -0.61
UPF3A-210ENST00000493727 ZCCHC3Q9NUD5 404 aaKnown RBP11.23□□□□□ -0.61
UPF3A-210ENST00000493727 DDX18Q9NVP1 670 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms