RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 LDB1Q86U70 411 aaPredicted RBP2.7□□□□□ -1.98
PTCD3-218ENST00000493430 NT5DC3Q86UY8 548 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 CDC20BQ86Y33 519 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 TMEM139Q8IV31 216 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 VSTM4Q8IW00 320 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 TC2NQ8N9U0 490 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 MSANTD4Q8NCY6 345 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 CCNYQ8ND76 341 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 IPMKQ8NFU5 416 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 OR8K5Q8NH50 307 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 CCDC26Q8TAB7 109 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 LKAAEAR1Q8TD35 194 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 ST8SIA4Q92187 359 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 HTRA1Q92743 480 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 ECHDC3Q96DC8 303 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 NXPE2Q96DL1 559 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 DTD2Q96FN9 168 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 RBM41Q96IZ5 413 aaKnown RBP2.7□□□□□ -1.98
PTCD3-218ENST00000493430 MAGED4Q96JG8 741 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 EGLN2Q96KS0 407 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 C1orf74Q96LT6 269 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 IL12RB2Q99665 862 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 MGME1Q9BQP7 344 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 BPIFA3Q9BQP9 254 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 PIGQQ9BRB3 760 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 FICDQ9BVA6 458 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 TDRD1Q9BXT4 1180 aaKnown RBP2.7□□□□□ -1.98
PTCD3-218ENST00000493430 EDEM3Q9BZQ6 932 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 LAT2Q9GZY6 243 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 TSPY26PQ9H489 355 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 DPEP2Q9H4A9 486 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 OSGEPL1Q9H4B0 414 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 PRORYQ9H606 182 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 AKIRIN1Q9H9L7 192 aaPredicted RBP2.7□□□□□ -1.98
PTCD3-218ENST00000493430 UGT1A7Q9HAW7 530 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 UGT1A10Q9HAW8 530 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 UGT1A8Q9HAW9 530 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 PARVAQ9NVD7 372 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 RBM22Q9NW64 420 aaKnown RBP eCLIP2.7□□□□□ -1.98
PTCD3-218ENST00000493430 AIPL1Q9NZN9 384 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 TBC1D29Q9UFV1 150 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 IL17BQ9UHF5 180 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 TP53TG3Q9ULZ0 132 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 SLC7A7Q9UM01 511 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 PLAGL1Q9UM63 463 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 B3GALT5Q9Y2C3 310 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 WDR37Q9Y2I8 494 aa2.7□□□□□ -1.98
PTCD3-218ENST00000493430 NUP214P35658 2090 aaPredicted RBP2.7□□□□□ -1.98
PTCD3-218ENST00000493430 NCOA6Q14686 2063 aaPredicted RBP2.7□□□□□ -1.98
PTCD3-218ENST00000493430 MED12LQ86YW9 2145 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 OBSCNQ5VST9 7968 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 SPENQ96T58 3664 aaKnown RBP2.69□□□□□ -1.98
PTCD3-218ENST00000493430 HECTD1Q9ULT8 2610 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 IGLV9-49A0A0B4J1Y8 123 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 IGHV5-10-1A0A0J9YXX1 117 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 A0A0J9YYE9 177 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 ARHGAP42A6NI28 874 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 B4E171 279 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 GOLGA6L19H0YKK7 550 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 GAPDHSO14556 408 aaPredicted RBP2.69□□□□□ -1.98
PTCD3-218ENST00000493430 BANF1O75531 89 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 IPO7O95373 1038 aaKnown RBP2.69□□□□□ -1.98
PTCD3-218ENST00000493430 LCA5LO95447 670 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 POP4O95707 220 aaKnown RBP2.69□□□□□ -1.98
PTCD3-218ENST00000493430 AGTP01019 485 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 TRBC1P01850 177 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 SERPING1P05155 500 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 H2AFZP0C0S5 128 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 CTSEP14091 401 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 CBLP22681 906 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 PTPN3P26045 913 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 PSMB4P28070 264 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 OAS2P29728 719 aaKnown RBP2.69□□□□□ -1.98
PTCD3-218ENST00000493430 TSPAN7P41732 249 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 GRIA1P42261 906 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 CDKN2BP42772 138 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 GPR1P46091 355 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 RABIFP47224 123 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 ZNF75DP51815 510 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 STC1P52823 247 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 NDST2P52849 883 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 CDH11P55287 796 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 YBEYP58557 167 aaPredicted RBP2.69□□□□□ -1.98
PTCD3-218ENST00000493430 OLR1P78380 273 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 CRADDP78560 199 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 MRPS25P82663 173 aaKnown RBP2.69□□□□□ -1.98
PTCD3-218ENST00000493430 OTUD4Q01804 1114 aaKnown RBP2.69□□□□□ -1.98
PTCD3-218ENST00000493430 TMEM115Q12893 351 aaPredicted RBP2.69□□□□□ -1.98
PTCD3-218ENST00000493430 PRKG2Q13237 762 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 SNX1Q13596 522 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 NFE2L1Q14494 772 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 PAFAH1B3Q15102 231 aaKnown RBP2.69□□□□□ -1.98
PTCD3-218ENST00000493430 CHRNA6Q15825 494 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 DEFB110Q30KQ9 67 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 LINC00303Q3SY05 128 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 PARP15Q460N3 678 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 FILIP1LQ4L180 1135 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 C14orf28Q4W4Y0 310 aa2.69□□□□□ -1.98
PTCD3-218ENST00000493430 FASTKD1Q53R41 847 aaKnown RBP2.69□□□□□ -1.98
PTCD3-218ENST00000493430 LRIF1Q5T3J3 769 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms