RNA–Protein interactions for RNA: ENST00000492980.1

CCDC88B-208, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 5

Gene CCDC88B, Length 2,118 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-208ENST00000492980 IFNA8P32881 189 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 FASLGP48023 281 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 ZNF91Q05481 1191 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 ELOCQ15369 112 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 GPR68Q15743 365 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 CCDC85BQ15834 202 aaPredicted RBP19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 MEDAGQ5VYS4 303 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 ZCCHC12Q6PEW1 402 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 BCDIN3DQ7Z5W3 292 aaKnown RBP19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 ZNF619Q8N2I2 560 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 PIK3R3Q92569 461 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 VMP1Q96GC9 406 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 PLEKHA8Q96JA3 519 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 OR5M11Q96RB7 305 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 STACQ99469 402 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 PRO3102Q9H379 93 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 EGLN3Q9H6Z9 239 aa19.67■□□□□ 0.74
CCDC88B-208ENST00000492980 J3QRK9 145 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 CHST10O43529 356 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 OR5F1O95221 314 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 RPS4Y1P22090 263 aaKnown RBP19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 GRK5P34947 590 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 MAP3K8P41279 467 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 OMPP47874 163 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 CLK1P49759 484 aaKnown RBP19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 TSPAN31Q12999 210 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 SMAD2Q15796 467 aaKnown RBP19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 MAPK14Q16539 360 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 PRTGQ2VWP7 1150 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 LINC00299Q6ZSB3 139 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 GDF7Q7Z4P5 450 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 NKAIN4Q8IVV8 208 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 FAM26EQ8N5C1 309 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 WDR36Q8NI36 951 aaKnown RBP19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 FNDC8Q8TC99 324 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 CTHRC1Q96CG8 243 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 SH3YL1Q96HL8 342 aaPredicted RBP19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 SAP130Q9H0E3 1048 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 CHRDQ9H2X0 955 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 CNIH4Q9P003 139 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 OSGIN1Q9UJX0 560 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 RPL36Q9Y3U8 105 aaKnown RBP19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 DBTP11182 482 aaKnown RBP19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 RGS6P49758 472 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 SMSP52788 366 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 EFNB1P98172 346 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 DOC2BQ14184 412 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 DECR1Q16698 335 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 EIPR1Q53HC9 387 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 SLC25A30Q5SVS4 291 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 DGAT2L6Q6ZPD8 337 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 COX18Q8N8Q8 333 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 LMX1AQ8TE12 382 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 ACOT11Q8WXI4 607 aaPredicted RBP19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 FGF11Q92914 225 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 ZHX1-C8orf76Q96EF9 292 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 SLC41A3Q96GZ6 507 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 FAM46AQ96IP4 442 aaKnown RBP19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 TSSK6Q9BXA6 273 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 DSN1Q9H410 356 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 FBXO34Q9NWN3 711 aa19.66■□□□□ 0.74
CCDC88B-208ENST00000492980 PRUNE2Q8WUY3 3088 aa19.65■□□□□ 0.74
CCDC88B-208ENST00000492980 TLX2O43763 284 aaPredicted RBP19.65■□□□□ 0.74
CCDC88B-208ENST00000492980 STX11O75558 287 aa19.65■□□□□ 0.74
CCDC88B-208ENST00000492980 MED26O95402 600 aa19.65■□□□□ 0.74
CCDC88B-208ENST00000492980 HSMCR30P0CW71 290 aa19.65■□□□□ 0.74
CCDC88B-208ENST00000492980 CAPZBP47756 277 aa19.65■□□□□ 0.74
CCDC88B-208ENST00000492980 SERPINB10P48595 397 aa19.65■□□□□ 0.74
CCDC88B-208ENST00000492980 ZNF136P52737 540 aa19.65■□□□□ 0.74
CCDC88B-208ENST00000492980 UBXN2BQ14CS0 331 aa19.65■□□□□ 0.74
CCDC88B-208ENST00000492980 ADCK1Q86TW2 530 aa19.65■□□□□ 0.74
CCDC88B-208ENST00000492980 OR8D4Q8NGM9 314 aa19.65■□□□□ 0.74
CCDC88B-208ENST00000492980 PIGXQ8TBF5 258 aa19.65■□□□□ 0.74
CCDC88B-208ENST00000492980 ARMC7Q9H6L4 198 aa19.65■□□□□ 0.74
CCDC88B-208ENST00000492980 ZBTB20Q9HC78 741 aaPredicted RBP19.65■□□□□ 0.74
CCDC88B-208ENST00000492980 KIAA0513O60268 411 aa19.64■□□□□ 0.74
CCDC88B-208ENST00000492980 RPLP0P05388 317 aaKnown RBP19.64■□□□□ 0.74
CCDC88B-208ENST00000492980 SLC35E2P0CK97 266 aa19.64■□□□□ 0.74
CCDC88B-208ENST00000492980 MAOBP27338 520 aa19.64■□□□□ 0.74
CCDC88B-208ENST00000492980 UGT2B10P36537 528 aa19.64■□□□□ 0.74
CCDC88B-208ENST00000492980 MED22Q15528 200 aa19.64■□□□□ 0.74
CCDC88B-208ENST00000492980 RASSF6Q6ZTQ3 369 aa19.64■□□□□ 0.74
CCDC88B-208ENST00000492980 GKN2Q86XP6 184 aa19.64■□□□□ 0.74
CCDC88B-208ENST00000492980 CACTIN-AS1Q8N1I8 211 aa19.64■□□□□ 0.74
CCDC88B-208ENST00000492980 TEX47Q8TBZ9 253 aa19.64■□□□□ 0.74
CCDC88B-208ENST00000492980 GPR151Q8TDV0 419 aa19.64■□□□□ 0.74
CCDC88B-208ENST00000492980 TMEM80Q96HE8 168 aa19.64■□□□□ 0.74
CCDC88B-208ENST00000492980 MAP3K3Q99759 626 aa19.64■□□□□ 0.74
CCDC88B-208ENST00000492980 SLIRPQ9GZT3 109 aaKnown RBP19.64■□□□□ 0.74
CCDC88B-208ENST00000492980 DCSTAMPQ9H295 470 aa19.64■□□□□ 0.74
CCDC88B-208ENST00000492980 UCK1Q9HA47 277 aa19.64■□□□□ 0.74
CCDC88B-208ENST00000492980 PALMDQ9NP74 551 aa19.64■□□□□ 0.74
CCDC88B-208ENST00000492980 AKIP1Q9NQ31 210 aa19.64■□□□□ 0.74
CCDC88B-208ENST00000492980 KCNE5Q9UJ90 142 aa19.64■□□□□ 0.74
CCDC88B-208ENST00000492980 KNL1Q8NG31 2342 aa19.64■□□□□ 0.73
CCDC88B-208ENST00000492980 TMEM265A0A087WTH1 108 aa19.64■□□□□ 0.73
CCDC88B-208ENST00000492980 A0A0A6YYC8 382 aaPredicted RBP19.64■□□□□ 0.73
CCDC88B-208ENST00000492980 I3L1I5 382 aaPredicted RBP19.64■□□□□ 0.73
CCDC88B-208ENST00000492980 CBX7O95931 251 aa19.64■□□□□ 0.73
CCDC88B-208ENST00000492980 DBIP07108 87 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms