RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 OR2A14Q96R47 310 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 SDHCQ99643 169 aaPredicted RBP11.64□□□□□ -0.55
HMGN1-220ENST00000492280 MCHR1Q99705 422 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 KLF15Q9UIH9 416 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 COLEC10Q9Y6Z7 277 aa11.64□□□□□ -0.55
HMGN1-220ENST00000492280 HEATR5AQ86XA9 2040 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 CDRT1O95170 752 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 SLC35G6P0C7Q6 338 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 NFATC4Q14934 902 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 ALG11Q2TAA5 492 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 ZNF791Q3KP31 576 aaPredicted RBP11.63□□□□□ -0.55
HMGN1-220ENST00000492280 SLC35F1Q5T1Q4 408 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 DESI1Q6ICB0 168 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 TYW3Q6IPR3 259 aaKnown RBP11.63□□□□□ -0.55
HMGN1-220ENST00000492280 MFSD12Q6NUT3 480 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 TMEM64Q6YI46 380 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 ZNF836Q6ZNA1 936 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 RRM2BQ7LG56 351 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 TRIM48Q8IWZ4 208 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 PHC2Q8IXK0 858 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 LRRC25Q8N386 305 aaPredicted RBP11.63□□□□□ -0.55
HMGN1-220ENST00000492280 NATD1Q8N6N6 113 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 C9orf43Q8TAL5 461 aaPredicted RBP11.63□□□□□ -0.55
HMGN1-220ENST00000492280 WDR92Q96MX6 357 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 OR2A5Q96R48 311 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 TBX5Q99593 518 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 PITHD1Q9GZP4 211 aaPredicted RBP11.63□□□□□ -0.55
HMGN1-220ENST00000492280 BCL2L10Q9HD36 194 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 ATP13A2Q9NQ11 1180 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 DZANK1Q9NVP4 752 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 CLDND1Q9NY35 253 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 SLC7A7Q9UM01 511 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 RPL36Q9Y3U8 105 aaKnown RBP11.63□□□□□ -0.55
HMGN1-220ENST00000492280 PCDHGB6Q9Y5F9 930 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 PIAS3Q9Y6X2 628 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 TRIOBPQ9H2D6 2365 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 ABCA7Q8IZY2 2146 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 A0A0G2JPF8 293 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 TCRBV21S2A2A0A5A6 115 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 HNRNPCL2B2RXH8 293 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 HNRNPCL3B7ZW38 293 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 FGF17O60258 216 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 KDM1AO60341 852 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 UBXN7O94888 489 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 HNRNPCL4P0DMR1 293 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 ACP2P11117 423 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 DDX5P17844 614 aaKnown RBP11.63□□□□□ -0.55
HMGN1-220ENST00000492280 ABATP80404 500 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 NNATQ16517 81 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 WDR88Q6ZMY6 472 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 ZAR1Q86SH2 424 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 UBE2J2Q8N2K1 259 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 NANOGP1Q8N7R0 232 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 OR13H1Q8NG92 308 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 PFN4Q8NHR9 129 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 CEP19Q96LK0 163 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 GABRG3Q99928 467 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 MND1Q9BWT6 205 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 PINK1Q9BXM7 581 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 TTTY10Q9BZA0 68 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 ENKD1Q9H0I2 346 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 C3orf14Q9HBI5 128 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 SMURF1Q9HCE7 757 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 OR6C2Q9NZP2 312 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 SNX7Q9UNH6 387 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 WDR45Q9Y484 360 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 KLK4Q9Y5K2 254 aa11.63□□□□□ -0.55
HMGN1-220ENST00000492280 SOCS6O14544 535 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 CT62P0C5K7 136 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 TPMTP51580 245 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 TNFRSF17Q02223 184 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 RGS1Q08116 209 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 FAM214AQ32MH5 1076 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 TMEM201Q5SNT2 666 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 GDF7Q7Z4P5 450 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 OR8H2Q8N162 312 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 GAL3ST3Q96A11 431 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 C1QTNF7Q9BXJ2 289 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 POLDIP3Q9BY77 421 aaKnown RBP11.62□□□□□ -0.55
HMGN1-220ENST00000492280 ACTRT3Q9BYD9 372 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 DPH1Q9BZG8 443 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 C20orf141Q9NUB4 165 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 C2orf42Q9NWW7 574 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 CCDC59Q9P031 241 aaKnown RBP11.62□□□□□ -0.55
HMGN1-220ENST00000492280 KCMF1Q9P0J7 381 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 NDOR1Q9UHB4 597 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 PCDH15Q96QU1 1955 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 AQP9O43315 295 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 NCR1O76036 304 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 PIPP12273 146 aaPredicted RBP11.62□□□□□ -0.55
HMGN1-220ENST00000492280 TNFSF8P32971 234 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 SOX6P35712 828 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 CDK5Q00535 292 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 TEKQ02763 1124 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 HNRNPA0Q13151 305 aaKnown RBP11.62□□□□□ -0.55
HMGN1-220ENST00000492280 PUS10Q3MIT2 529 aaKnown RBP11.62□□□□□ -0.55
HMGN1-220ENST00000492280 SPANXN2Q5MJ10 180 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 ATAD3BQ5T9A4 648 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 CDC73Q6P1J9 531 aa11.62□□□□□ -0.55
HMGN1-220ENST00000492280 SLC27A4Q6P1M0 643 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms