RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 IL33O95760 270 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 SHBGP04278 402 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 FGF4P08620 206 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 TMIGD3P0DMS9 266 aaPredicted RBP7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 UROSP10746 265 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 MYL2P10916 166 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 CPA3P15088 417 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 TACR1P25103 407 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 DPP4P27487 766 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 EVI2BP34910 448 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 GCKP35557 465 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 CCT5P48643 541 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 STARP49675 285 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 DSCR4P56555 118 aaPredicted RBP7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 C2orf80Q0P641 193 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 GAB1Q13480 694 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 PDE7AQ13946 482 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 GUSBP1Q15486 140 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 UGT3A2Q3SY77 523 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 AAGABQ6PD74 315 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 SCIMPQ6UWF3 145 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 Q6ZSR9 355 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 CAMKMTQ7Z624 323 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 IFNEQ86WN2 208 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 TGIF2LYQ8IUE0 185 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 SLC44A2Q8IWA5 706 aaPredicted RBP7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 HOMEZQ8IX15 550 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 CCNYL1Q8N7R7 359 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 LRRN4CLQ8ND94 238 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 OR2M3Q8NG83 312 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 OR14L1PQ8NHC6 308 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 GOT1L1Q8NHS2 421 aaPredicted RBP7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 FAM110BQ8TC76 370 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 DTNBP1Q96EV8 351 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 DACH2Q96NX9 599 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 ALPK1Q96QP1 1244 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 EBPLQ9BY08 206 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 ACBD3Q9H3P7 528 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 PIGMQ9H3S5 423 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 GLIPR2Q9H4G4 154 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 L2HGDHQ9H9P8 463 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 RRAGDQ9NQL2 400 aaPredicted RBP7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 DLL4Q9NR61 685 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 GIMAP4Q9NUV9 329 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 FAM120CQ9NX05 1096 aaKnown RBP7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 TBK1Q9UHD2 729 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 PRR14LQ5THK1 2151 aa7.58□□□□□ -1.2
SMARCB1-207ENST00000491967 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 C17orf51A8MQB3 221 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 MSTNO14793 375 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 TNFRSF21O75509 655 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 TGM6O95932 706 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 CGAP01215 116 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 HRGP04196 525 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 JUNP05412 331 aaKnown RBP7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 NGFRP08138 427 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 PEPDP12955 493 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 MC3RP41968 323 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 NCBP2P52298 156 aaKnown RBP eCLIP7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 AGFG1P52594 562 aaKnown RBP7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 PRR5P85299 388 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 BTKQ06187 659 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 GANABQ14697 944 aaKnown RBP7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 TOMM20Q15388 145 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 SPDYAQ5MJ70 313 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 OR5M10Q6IEU7 315 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 PAMR1Q6UXH9 720 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 OR2T11Q8NH01 316 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 LINC01560Q8TB33 94 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 EFHD2Q96C19 240 aaPredicted RBP7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 STARD4Q96DR4 205 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 GIMAP5Q96F15 307 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 EGLN2Q96KS0 407 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 BBS4Q96RK4 519 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 CCT7Q99832 543 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 RHOXF2Q9BQY4 288 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 TRMOQ9BU70 441 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 TUBB1Q9H4B7 451 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 SDHAF3Q9NRP4 125 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 ACSS1Q9NUB1 689 aaPredicted RBP7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 CCM2LQ9NUG4 571 aaPredicted RBP7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 C1orf109Q9NX04 203 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 MKS1Q9NXB0 559 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 FLRT3Q9NZU0 649 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 EDARQ9UNE0 448 aa7.57□□□□□ -1.2
SMARCB1-207ENST00000491967 HEATR5AQ86XA9 2040 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 A0A1W2PNV4 684 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 A0A1W2PPR1 153 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 H0Y3Z8 333 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 SLC28A1O00337 649 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 NKX2-2O95096 273 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 ATE1O95260 518 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 IGKV1D-16P01601 117 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 FOSL1P15407 271 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 KRT4P19013 534 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 IL12BP29460 328 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 KRT20P35900 424 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 KIR2DL2P43627 348 aaPredicted RBP7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 DGKQP52824 942 aa7.56□□□□□ -1.2
SMARCB1-207ENST00000491967 SUCLG1P53597 346 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms