RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 TMEM150CB9EJG8 249 aa21.28■■□□□ 1
USF3-203ENST00000491165 J3KTA2 159 aa21.28■■□□□ 1
USF3-203ENST00000491165 DSCR3O14972 297 aa21.28■■□□□ 1
USF3-203ENST00000491165 SLC35G6P0C7Q6 338 aa21.28■■□□□ 1
USF3-203ENST00000491165 S100A5P33763 92 aa21.28■■□□□ 1
USF3-203ENST00000491165 XCR1P46094 333 aa21.28■■□□□ 1
USF3-203ENST00000491165 CYP27C1Q4G0S4 372 aa21.28■■□□□ 1
USF3-203ENST00000491165 TOR1AIP1Q5JTV8 583 aa21.28■■□□□ 1
USF3-203ENST00000491165 ZNF793Q6ZN11 406 aa21.28■■□□□ 1
USF3-203ENST00000491165 OR5AK3PQ8NH89 298 aa21.28■■□□□ 1
USF3-203ENST00000491165 OR1L3Q8NH93 324 aa21.28■■□□□ 1
USF3-203ENST00000491165 ZCCHC10Q8TBK6 192 aa21.28■■□□□ 1
USF3-203ENST00000491165 ZNF501Q96CX3 271 aaPredicted RBP21.28■■□□□ 1
USF3-203ENST00000491165 TEFMQ96QE5 360 aaKnown RBP21.28■■□□□ 1
USF3-203ENST00000491165 ACER3Q9NUN7 267 aa21.28■■□□□ 1
USF3-203ENST00000491165 MS4A12Q9NXJ0 267 aa21.28■■□□□ 1
USF3-203ENST00000491165 SIDT1Q9NXL6 827 aaKnown RBP21.28■■□□□ 1
USF3-203ENST00000491165 TAS2R9Q9NYW1 312 aa21.28■■□□□ 1
USF3-203ENST00000491165 FAM32AQ9Y421 112 aaKnown RBP21.28■■□□□ 1
USF3-203ENST00000491165 PCDHGA1Q9Y5H4 931 aa21.28■■□□□ 1
USF3-203ENST00000491165 ERI3O43414 337 aaKnown RBP21.27■■□□□ 1
USF3-203ENST00000491165 TBX1O43435 398 aa21.27■■□□□ 1
USF3-203ENST00000491165 DKK1O94907 266 aa21.27■■□□□ 1
USF3-203ENST00000491165 RGS6P49758 472 aa21.27■■□□□ 1
USF3-203ENST00000491165 CDC42P60953 191 aa21.27■■□□□ 1
USF3-203ENST00000491165 SLC13A2Q13183 592 aa21.27■■□□□ 1
USF3-203ENST00000491165 IRF3Q14653 427 aa21.27■■□□□ 1
USF3-203ENST00000491165 MPEG1Q2M385 716 aa21.27■■□□□ 1
USF3-203ENST00000491165 FAM71E1Q6IPT2 247 aa21.27■■□□□ 1
USF3-203ENST00000491165 CDADC1Q9BWV3 514 aa21.27■■□□□ 1
USF3-203ENST00000491165 OR51E2Q9H255 320 aa21.27■■□□□ 1
USF3-203ENST00000491165 FGF21Q9NSA1 209 aa21.27■■□□□ 1
USF3-203ENST00000491165 SACM1LQ9NTJ5 587 aa21.27■■□□□ 1
USF3-203ENST00000491165 ANGPT4Q9Y264 503 aa21.27■■□□□ 1
USF3-203ENST00000491165 KNTC1P50748 2209 aa21.27■■□□□ 1
USF3-203ENST00000491165 PCDH17O14917 1159 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 CCNB2O95067 398 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 GADD45GO95257 159 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 FTH1P19P0C7X4 201 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 ZNF888P0CJ79 500 aaPredicted RBP21.26■□□□□ 0.99
USF3-203ENST00000491165 BSGP35613 385 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 LIMS1P48059 325 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 TAS2R50P59544 299 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 ZNF45Q02386 682 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 PRTGQ2VWP7 1150 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 CDCP2Q5VXM1 449 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 ZNF367Q7RTV3 350 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 METTL4Q8N3J2 472 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 CAMKVQ8NCB2 501 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 C9orf43Q8TAL5 461 aaPredicted RBP21.26■□□□□ 0.99
USF3-203ENST00000491165 GTPBP3Q969Y2 492 aaKnown RBP21.26■□□□□ 0.99
USF3-203ENST00000491165 MAPKAP1Q9BPZ7 522 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 APMAPQ9HDC9 416 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 SEC16AO15027 2179 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 PMS2P1A4D2B8 440 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 SRPX2O60687 465 aaPredicted RBP21.26■□□□□ 0.99
USF3-203ENST00000491165 KRT75O95678 551 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 ARAFP10398 606 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 POU2F1P14859 743 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 SOAT1P35610 550 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 HMGA2P52926 109 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 PCBP3P57721 371 aaKnown RBP21.26■□□□□ 0.99
USF3-203ENST00000491165 PRKCDQ05655 676 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 STEAP3Q658P3 488 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 ABHD17CQ6PCB6 329 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 B3GNT7Q8NFL0 401 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 OR2L5Q8NG80 312 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 MTERF3Q96E29 417 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 C10orf90Q96M02 699 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 PRDM7Q9NQW5 492 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 ENPP4Q9Y6X5 453 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 SCN2AQ99250 2005 aa21.26■□□□□ 0.99
USF3-203ENST00000491165 M0R129 80 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 DNAJB6O75190 326 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 MSL3P1P0C860 447 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 HSMCR30P0CW71 290 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 SIM1P81133 766 aaPredicted RBP21.25■□□□□ 0.99
USF3-203ENST00000491165 E2F1Q01094 437 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 RGS1Q08116 209 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 PTGES3Q15185 160 aaKnown RBP21.25■□□□□ 0.99
USF3-203ENST00000491165 POC5Q8NA72 575 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 OR6C1Q96RD1 312 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 CHCHD6Q9BRQ6 235 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 TMEM121BQ9BXQ6 578 aaPredicted RBP21.25■□□□□ 0.99
USF3-203ENST00000491165 IFT52Q9Y366 437 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 A0A1W2PRB8 838 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 EFCAB10A6NFE3 127 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 TIAF1O95411 115 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 KLK1P06870 262 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 SMIM10L1P0DMW3 83 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 CCL4P13236 92 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 CSRP1P21291 193 aaKnown RBP21.25■□□□□ 0.99
USF3-203ENST00000491165 CBLP22681 906 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 GANABQ14697 944 aaKnown RBP21.25■□□□□ 0.99
USF3-203ENST00000491165 SLC30A8Q8IWU4 369 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 BMPERQ8N8U9 685 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 HTRA1Q92743 480 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 PMEPA1Q969W9 287 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 SMIM10Q96HG1 83 aa21.25■□□□□ 0.99
USF3-203ENST00000491165 CENPOQ9BU64 300 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms