RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 SENP1Q9P0U3 644 aa14.31□□□□□ -0.12
PLOD3-216ENST00000489927 ZNF337Q9Y3M9 751 aa14.31□□□□□ -0.12
PLOD3-216ENST00000489927 OR10H1Q9Y4A9 318 aa14.31□□□□□ -0.12
PLOD3-216ENST00000489927 TRIM64A6NGJ6 449 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 TRIM64BA6NI03 449 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 TRIM49D1C9J1S8 452 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 C16orf97H3BN30 126 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 SEC14L5O43304 696 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 EMC8O43402 210 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 PLOD3O60568 738 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 KRT6AP02538 564 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 KRT6BP04259 564 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 HK1P19367 917 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 PCSK6P29122 969 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 KCNJ5P48544 419 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 KRT6CP48668 564 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 SERPINB9P50453 376 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 MRPS22P82650 360 aaKnown RBP14.3□□□□□ -0.12
PLOD3-216ENST00000489927 PSG6Q00889 435 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 STX5Q13190 355 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 C8orf74Q6P047 294 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 C22orf34Q6ZV56 151 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 RELL1Q8IUW5 271 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 PPP1R14CQ8TAE6 165 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 FNDC9Q8TBE3 224 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 C16orf78Q8WTQ4 265 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 APIPQ96GX9 242 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 ZC3HAV1LQ96H79 300 aaKnown RBP14.3□□□□□ -0.12
PLOD3-216ENST00000489927 ZNF845Q96IR2 970 aaPredicted RBP14.3□□□□□ -0.12
PLOD3-216ENST00000489927 SLC39A3Q9BRY0 314 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 BDH2Q9BUT1 245 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 ACPTQ9BZG2 426 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 RTN4RQ9BZR6 473 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 CDC42EP4Q9H3Q1 356 aaKnown RBP14.3□□□□□ -0.12
PLOD3-216ENST00000489927 RNF122Q9H9V4 155 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 GIMAP4Q9NUV9 329 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 FLRT3Q9NZU0 649 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 MED11Q9P086 117 aa14.3□□□□□ -0.12
PLOD3-216ENST00000489927 ZANQ9Y493 2812 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 KIAA1324LA8MWY0 1029 aaPredicted RBP14.29□□□□□ -0.12
PLOD3-216ENST00000489927 H3BML4 177 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 FADS1O60427 444 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 ULK1O75385 1050 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 TNFRSF21O75509 655 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 SUPT7LO94864 414 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 CD8BP10966 210 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 LOXP28300 417 aaPredicted RBP14.29□□□□□ -0.12
PLOD3-216ENST00000489927 MPIP34949 423 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 HTR6P50406 440 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 CLDN20P56880 219 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 EEFSECP57772 596 aaKnown RBP14.29□□□□□ -0.12
PLOD3-216ENST00000489927 ZNF155Q12901 538 aaPredicted RBP14.29□□□□□ -0.12
PLOD3-216ENST00000489927 HEPACAMQ14CZ8 416 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 PON3Q15166 354 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 RASA2Q15283 850 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 UNC50Q53HI1 259 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 SH2D4BQ5SQS7 431 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 TEX35Q5T0J7 233 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 SYT10Q6XYQ8 523 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 C20orf204Q6ZNR8 217 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 FAM9CQ8IZT9 166 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 ZNF610Q8N9Z0 462 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 UHMK1Q8TAS1 419 aaKnown RBP14.29□□□□□ -0.12
PLOD3-216ENST00000489927 DCAKDQ8WVC6 231 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 ZNF382Q96SR6 550 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 MDFIQ99750 246 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 ZNF175Q9Y473 711 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 FBN3Q75N90 2809 aa14.29□□□□□ -0.12
PLOD3-216ENST00000489927 OR2M5A3KFT3 312 aa14.28□□□□□ -0.12
PLOD3-216ENST00000489927 POC1B-GALNT4F8VUJ3 575 aa14.28□□□□□ -0.12
PLOD3-216ENST00000489927 TIA1P31483 386 aaKnown RBP eCLIP14.28□□□□□ -0.12
PLOD3-216ENST00000489927 ETF1P62495 437 aaKnown RBP14.28□□□□□ -0.12
PLOD3-216ENST00000489927 ACSM2AQ08AH3 577 aa14.28□□□□□ -0.12
PLOD3-216ENST00000489927 GANABQ14697 944 aaKnown RBP14.28□□□□□ -0.12
PLOD3-216ENST00000489927 GUSBP1Q15486 140 aa14.28□□□□□ -0.12
PLOD3-216ENST00000489927 JMJD1CQ15652 2540 aa14.28□□□□□ -0.12
PLOD3-216ENST00000489927 PRSS53Q2L4Q9 553 aa14.28□□□□□ -0.12
PLOD3-216ENST00000489927 SPIN4Q56A73 249 aa14.28□□□□□ -0.12
PLOD3-216ENST00000489927 ZNF678Q5SXM1 525 aa14.28□□□□□ -0.12
PLOD3-216ENST00000489927 ACSM2BQ68CK6 577 aa14.28□□□□□ -0.12
PLOD3-216ENST00000489927 ANKRD34AQ69YU3 496 aa14.28□□□□□ -0.12
PLOD3-216ENST00000489927 GPRIN3Q6ZVF9 776 aa14.28□□□□□ -0.12
PLOD3-216ENST00000489927 C17orf53Q8N3J3 647 aaPredicted RBP14.28□□□□□ -0.12
PLOD3-216ENST00000489927 METTL6Q8TCB7 284 aa14.28□□□□□ -0.12
PLOD3-216ENST00000489927 C11orf24Q96F05 449 aaPredicted RBP14.28□□□□□ -0.12
PLOD3-216ENST00000489927 TMEM237Q96Q45 408 aa14.28□□□□□ -0.12
PLOD3-216ENST00000489927 BBS4Q96RK4 519 aa14.28□□□□□ -0.12
PLOD3-216ENST00000489927 EBPLQ9BY08 206 aa14.28□□□□□ -0.12
PLOD3-216ENST00000489927 STMN4Q9H169 189 aaPredicted RBP14.28□□□□□ -0.12
PLOD3-216ENST00000489927 SDHAF3Q9NRP4 125 aa14.28□□□□□ -0.12
PLOD3-216ENST00000489927 DMGDHQ9UI17 866 aaKnown RBP14.28□□□□□ -0.12
PLOD3-216ENST00000489927 ZNF180Q9UJW8 692 aa14.28□□□□□ -0.12
PLOD3-216ENST00000489927 ABCG2Q9UNQ0 655 aa14.28□□□□□ -0.12
PLOD3-216ENST00000489927 MYO1GB0I1T2 1018 aa14.27□□□□□ -0.13
PLOD3-216ENST00000489927 LINC01387J3KSC0 135 aa14.27□□□□□ -0.13
PLOD3-216ENST00000489927 COQ9O75208 318 aa14.27□□□□□ -0.13
PLOD3-216ENST00000489927 JUNP05412 331 aaKnown RBP14.27□□□□□ -0.13
PLOD3-216ENST00000489927 HMOX2P30519 316 aa14.27□□□□□ -0.13
PLOD3-216ENST00000489927 FGFBP1Q14512 234 aa14.27□□□□□ -0.13
PLOD3-216ENST00000489927 CYP27C1Q4G0S4 372 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms