RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 XAGE5Q8WWM1 108 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 PIGKQ92643 395 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 TANKQ92844 425 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 C10orf90Q96M02 699 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 DMRTB1Q96MA1 342 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 DACH2Q96NX9 599 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 NIPSNAP1Q9BPW8 284 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 TMEM168Q9H0V1 697 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 KLHL31Q9H511 634 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 MTHFD2LQ9H903 347 aaPredicted RBP7.92□□□□□ -1.14
VTI1A-207ENST00000489357 SIAEQ9HAT2 523 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 KRCC1Q9NPI7 259 aaPredicted RBP7.92□□□□□ -1.14
VTI1A-207ENST00000489357 RXFP3Q9NSD7 469 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 TBC1D23Q9NUY8 699 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 ACTR10Q9NZ32 417 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 KCMF1Q9P0J7 381 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 ERVK-18Q9QC07 812 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 TRPC4Q9UBN4 977 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 APOBEC3BQ9UH17 382 aaKnown RBP7.92□□□□□ -1.14
VTI1A-207ENST00000489357 SLC13A4Q9UKG4 626 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 DAPP1Q9UN19 280 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 SLC6A14Q9UN76 642 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 PLEKHM1Q9Y4G2 1056 aa7.92□□□□□ -1.14
VTI1A-207ENST00000489357 NUP214P35658 2090 aaPredicted RBP7.91□□□□□ -1.14
VTI1A-207ENST00000489357 SPTBN2O15020 2390 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 WASHC1A8K0Z3 465 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 PCDH17O14917 1159 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 PGRMC2O15173 223 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 PLOD3O60568 738 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 CNOT3O75175 753 aaKnown RBP7.91□□□□□ -1.14
VTI1A-207ENST00000489357 ERAL1O75616 437 aaKnown RBP7.91□□□□□ -1.14
VTI1A-207ENST00000489357 INMTO95050 263 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 GASTP01350 101 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 MT-ND2P03891 347 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 ZNF888P0CJ79 500 aaPredicted RBP7.91□□□□□ -1.14
VTI1A-207ENST00000489357 ALOX12P18054 663 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 CPN2P22792 545 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 CHMP24386 653 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 CERS1P27544 350 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 EPHA2P29317 976 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 UGT2B10P36537 528 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 CTSKP43235 329 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 IDH2P48735 452 aaKnown RBP7.91□□□□□ -1.14
VTI1A-207ENST00000489357 RPS26P62854 115 aaKnown RBP7.91□□□□□ -1.14
VTI1A-207ENST00000489357 BTN3A2P78410 334 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 ST3GAL3Q11203 375 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 GPR18Q14330 331 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 IRF3Q14653 427 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 TRAM2Q15035 370 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 ARHGAP11BQ3KRB8 267 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 PRRT3Q5FWE3 981 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 ENTPD8Q5MY95 495 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 EXOSC6Q5RKV6 272 aaKnown RBP7.91□□□□□ -1.14
VTI1A-207ENST00000489357 C12orf73Q69YU5 71 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 TCEAL6Q6IPX3 200 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 MFSD12Q6NUT3 480 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 C1orf94Q6P1W5 598 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 FBXO42Q6P3S6 717 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 FIGLAQ6QHK4 219 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 AHSA2Q719I0 299 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 ZNF367Q7RTV3 350 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 AMER3Q8N944 861 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 NUP43Q8NFH3 380 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 ZNF675Q8TD23 568 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 ADAMTS15Q8TE58 950 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 OIT3Q8WWZ8 545 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 RAB8BQ92930 207 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 TCEAL3Q969E4 200 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 SLC38A4Q969I6 547 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 SLC35B4Q969S0 331 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 PMEPA1Q969W9 287 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 OTUB1Q96FW1 271 aaPredicted RBP7.91□□□□□ -1.14
VTI1A-207ENST00000489357 STACQ99469 402 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 ARHGDIGQ99819 225 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 FNDC11Q9BVV2 318 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 TEX12Q9BXU0 123 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 WDR12Q9GZL7 423 aaKnown RBP7.91□□□□□ -1.14
VTI1A-207ENST00000489357 CHRNA10Q9GZZ6 450 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 ARMC7Q9H6L4 198 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 HMG20AQ9NP66 347 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 DUSP22Q9NRW4 184 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 RASSF1Q9NS23 344 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 RLIMQ9NVW2 624 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 CPNE7Q9UBL6 633 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 REV1Q9UBZ9 1251 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 MKLN1Q9UL63 735 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 A4GNTQ9UNA3 340 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 ASXL3Q9C0F0 2248 aa7.91□□□□□ -1.14
VTI1A-207ENST00000489357 TRBV4-1A0A0J9YWV2 114 aa7.9□□□□□ -1.14
VTI1A-207ENST00000489357 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.9□□□□□ -1.14
VTI1A-207ENST00000489357 LNP1A1A4G5 178 aa7.9□□□□□ -1.14
VTI1A-207ENST00000489357 HYKKA2RU49 373 aa7.9□□□□□ -1.14
VTI1A-207ENST00000489357 TTC36A6NLP5 189 aa7.9□□□□□ -1.14
VTI1A-207ENST00000489357 C4orf51C9J302 202 aa7.9□□□□□ -1.14
VTI1A-207ENST00000489357 M0R3G1 203 aa7.9□□□□□ -1.14
VTI1A-207ENST00000489357 OR10H3O60404 316 aa7.9□□□□□ -1.14
VTI1A-207ENST00000489357 SRPX2O60687 465 aaPredicted RBP7.9□□□□□ -1.14
VTI1A-207ENST00000489357 FMO6PO60774 539 aa7.9□□□□□ -1.14
VTI1A-207ENST00000489357 NME6O75414 186 aaPredicted RBP7.9□□□□□ -1.14
VTI1A-207ENST00000489357 ALPPP05187 535 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms