RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 DDCP20711 480 aa16.64■□□□□ 0.25
HDAC6-231ENST00000488905 ATP5F1P24539 256 aaPredicted RBP16.64■□□□□ 0.25
HDAC6-231ENST00000488905 GCAP28676 217 aa16.64■□□□□ 0.25
HDAC6-231ENST00000488905 PKNOX1P55347 436 aa16.64■□□□□ 0.25
HDAC6-231ENST00000488905 PSG6Q00889 435 aa16.64■□□□□ 0.25
HDAC6-231ENST00000488905 ZNF763Q0D2J5 394 aa16.64■□□□□ 0.25
HDAC6-231ENST00000488905 GANABQ14697 944 aaKnown RBP16.64■□□□□ 0.25
HDAC6-231ENST00000488905 RAET1LQ5VY80 246 aa16.64■□□□□ 0.25
HDAC6-231ENST00000488905 TIFABQ6ZNK6 161 aa16.64■□□□□ 0.25
HDAC6-231ENST00000488905 CHMP1BQ7LBR1 199 aa16.64■□□□□ 0.25
HDAC6-231ENST00000488905 LCA5Q86VQ0 697 aa16.64■□□□□ 0.25
HDAC6-231ENST00000488905 CXorf67Q86X51 503 aaPredicted RBP16.64■□□□□ 0.25
HDAC6-231ENST00000488905 CNEP1R1Q8N9A8 125 aa16.64■□□□□ 0.25
HDAC6-231ENST00000488905 STARD4Q96DR4 205 aa16.64■□□□□ 0.25
HDAC6-231ENST00000488905 C16orf45Q96MC5 204 aaPredicted RBP16.64■□□□□ 0.25
HDAC6-231ENST00000488905 BBS4Q96RK4 519 aa16.64■□□□□ 0.25
HDAC6-231ENST00000488905 KCNA7Q96RP8 456 aa16.64■□□□□ 0.25
HDAC6-231ENST00000488905 SMR3AQ99954 134 aa16.64■□□□□ 0.25
HDAC6-231ENST00000488905 ABCG2Q9UNQ0 655 aa16.64■□□□□ 0.25
HDAC6-231ENST00000488905 ROS1P08922 2347 aa16.64■□□□□ 0.25
HDAC6-231ENST00000488905 A0A087WV62 115 aa16.63■□□□□ 0.25
HDAC6-231ENST00000488905 CCDC151A5D8V7 595 aa16.63■□□□□ 0.25
HDAC6-231ENST00000488905 MYO1GB0I1T2 1018 aa16.63■□□□□ 0.25
HDAC6-231ENST00000488905 SIAH2O43255 324 aa16.63■□□□□ 0.25
HDAC6-231ENST00000488905 ANXA4P09525 319 aaPredicted RBP16.63■□□□□ 0.25
HDAC6-231ENST00000488905 HK1P19367 917 aa16.63■□□□□ 0.25
HDAC6-231ENST00000488905 IMPDH1P20839 514 aa16.63■□□□□ 0.25
HDAC6-231ENST00000488905 ADSLP30566 484 aaPredicted RBP16.63■□□□□ 0.25
HDAC6-231ENST00000488905 CCKARP32238 428 aa16.63■□□□□ 0.25
HDAC6-231ENST00000488905 MC3RP41968 323 aa16.63■□□□□ 0.25
HDAC6-231ENST00000488905 PCYT1AP49585 367 aa16.63■□□□□ 0.25
HDAC6-231ENST00000488905 NKX6-1P78426 367 aaPredicted RBP16.63■□□□□ 0.25
HDAC6-231ENST00000488905 SH2D4BQ5SQS7 431 aa16.63■□□□□ 0.25
HDAC6-231ENST00000488905 LGSNQ5TDP6 509 aa16.63■□□□□ 0.25
HDAC6-231ENST00000488905 SHEQ5VZ18 495 aa16.63■□□□□ 0.25
HDAC6-231ENST00000488905 SLC22A9Q8IVM8 553 aa16.63■□□□□ 0.25
HDAC6-231ENST00000488905 MEIOBQ8N635 442 aa16.63■□□□□ 0.25
HDAC6-231ENST00000488905 OR2M3Q8NG83 312 aa16.63■□□□□ 0.25
HDAC6-231ENST00000488905 CDC26Q8NHZ8 85 aa16.63■□□□□ 0.25
HDAC6-231ENST00000488905 L3HYPDHQ96EM0 354 aa16.63■□□□□ 0.25
HDAC6-231ENST00000488905 DSN1Q9H410 356 aa16.63■□□□□ 0.25
HDAC6-231ENST00000488905 SIRT5Q9NXA8 310 aa16.63■□□□□ 0.25
HDAC6-231ENST00000488905 C6orf203Q9P0P8 240 aaPredicted RBP16.63■□□□□ 0.25
HDAC6-231ENST00000488905 TIMM22Q9Y584 194 aa16.63■□□□□ 0.25
HDAC6-231ENST00000488905 CTIFO43310 598 aaKnown RBP16.62■□□□□ 0.25
HDAC6-231ENST00000488905 SLITRK5O94991 958 aa16.62■□□□□ 0.25
HDAC6-231ENST00000488905 JUNP05412 331 aaKnown RBP16.62■□□□□ 0.25
HDAC6-231ENST00000488905 ABHD2P08910 425 aa16.62■□□□□ 0.25
HDAC6-231ENST00000488905 INHBBP09529 407 aa16.62■□□□□ 0.25
HDAC6-231ENST00000488905 CD79BP40259 229 aa16.62■□□□□ 0.25
HDAC6-231ENST00000488905 NCBP2P52298 156 aaKnown RBP eCLIP16.62■□□□□ 0.25
HDAC6-231ENST00000488905 PRKAA2P54646 552 aa16.62■□□□□ 0.25
HDAC6-231ENST00000488905 CLDN15P56746 228 aa16.62■□□□□ 0.25
HDAC6-231ENST00000488905 BTKQ06187 659 aa16.62■□□□□ 0.25
HDAC6-231ENST00000488905 LTBQ06643 244 aa16.62■□□□□ 0.25
HDAC6-231ENST00000488905 FAM27E3Q08E93 113 aa16.62■□□□□ 0.25
HDAC6-231ENST00000488905 STX5Q13190 355 aa16.62■□□□□ 0.25
HDAC6-231ENST00000488905 TMEM107Q6UX40 140 aa16.62■□□□□ 0.25
HDAC6-231ENST00000488905 FIG4Q92562 907 aa16.62■□□□□ 0.25
HDAC6-231ENST00000488905 FAM111AQ96PZ2 611 aa16.62■□□□□ 0.25
HDAC6-231ENST00000488905 OPN3Q9H1Y3 402 aaPredicted RBP16.62■□□□□ 0.25
HDAC6-231ENST00000488905 KLHL28Q9NXS3 571 aa16.62■□□□□ 0.25
HDAC6-231ENST00000488905 FLRT3Q9NZU0 649 aa16.62■□□□□ 0.25
HDAC6-231ENST00000488905 SERTM1A2A2V5 107 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 DEFB108AA8MXU0 73 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 H0YC42 278 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 SEC14L5O43304 696 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 FADS1O60427 444 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 PSMG1O95456 288 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 NTSP30990 170 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 KIR2DL2P43627 348 aaPredicted RBP16.61■□□□□ 0.25
HDAC6-231ENST00000488905 TPD52P55327 224 aaPredicted RBP16.61■□□□□ 0.25
HDAC6-231ENST00000488905 EEFSECP57772 596 aaKnown RBP16.61■□□□□ 0.25
HDAC6-231ENST00000488905 SIRPAP78324 504 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 PRSS53Q2L4Q9 553 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 CYP27C1Q4G0S4 372 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 SPDYAQ5MJ70 313 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 Q5PR19 223 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 ZNF474Q6S9Z5 364 aaPredicted RBP16.61■□□□□ 0.25
HDAC6-231ENST00000488905 BTLAQ7Z6A9 289 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 ZNF592Q92610 1267 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 PGM2Q96G03 612 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 WFIKKN1Q96NZ8 548 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 MED18Q9BUE0 208 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 PINK1Q9BXM7 581 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 GSTO2Q9H4Y5 243 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 MIEF1Q9NQG6 463 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 DDX18Q9NVP1 670 aaKnown RBP16.61■□□□□ 0.25
HDAC6-231ENST00000488905 FAM120CQ9NX05 1096 aaKnown RBP16.61■□□□□ 0.25
HDAC6-231ENST00000488905 ZNF226Q9NYT6 803 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 MED11Q9P086 117 aa16.61■□□□□ 0.25
HDAC6-231ENST00000488905 C19orf53Q9UNZ5 99 aaPredicted RBP16.61■□□□□ 0.25
HDAC6-231ENST00000488905 JMJD1CQ15652 2540 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 OR2M5A3KFT3 312 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 H3BML4 177 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 POU2F1P14859 743 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 CRYGSP22914 178 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 SUCLG1P53597 346 aaKnown RBP16.6■□□□□ 0.25
HDAC6-231ENST00000488905 FOXA1P55317 472 aa16.6■□□□□ 0.25
HDAC6-231ENST00000488905 C2orf80Q0P641 193 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms