RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 UQCRC2P22695 453 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 IL12BP29460 328 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 GABRA3P34903 492 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 CDKN2CP42773 168 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 SQLEQ14534 574 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 DECR1Q16698 335 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.07■□□□□ 0.32
PTCD3-217ENST00000488801 KRTCAP3Q53RY4 240 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 SLC30A6Q6NXT4 461 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 BLOC1S3Q6QNY0 202 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 TMEM251Q8N6I4 163 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 FBXO30Q8TB52 745 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 NEURL3Q96EH8 262 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 RMND5BQ96G75 393 aaPredicted RBP17.07■□□□□ 0.32
PTCD3-217ENST00000488801 ZNF597Q96LX8 424 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 DOCK7Q96N67 2140 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 INPP5KQ9BT40 448 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 DOHHQ9BU89 302 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 OSBPL11Q9BXB4 747 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 ZFP64Q9NPA5 681 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 BOKQ9UMX3 212 aaPredicted RBP17.07■□□□□ 0.32
PTCD3-217ENST00000488801 VPS4AQ9UN37 437 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 ABCG2Q9UNQ0 655 aa17.07■□□□□ 0.32
PTCD3-217ENST00000488801 A0A0G2JND7 137 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 B4DXG7 233 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 TFECO14948 347 aaPredicted RBP17.06■□□□□ 0.32
PTCD3-217ENST00000488801 SNPHO15079 494 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 HS6ST1O60243 411 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 FADS1O60427 444 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 ICOSLGO75144 302 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 SOX30O94993 753 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 KCNK2O95069 426 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 IGHG3P01860 377 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 NGFRP08138 427 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 KRT16P08779 473 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 ALOX5P09917 674 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 SOAT1P35610 550 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 STX1BP61266 288 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 KCNJ2P63252 427 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 TIGD2Q4W5G0 525 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 BHLHB9Q6PI77 547 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 C6orf120Q7Z4R8 191 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 SLC22A16Q86VW1 577 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 CLEC4FQ8N1N0 589 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 FAM109AQ8N4B1 249 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 OR52N2Q8NGI0 321 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 GPR151Q8TDV0 419 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 SLC9A6Q92581 669 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 TMCO6Q96DC7 493 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 PHF12Q96QT6 1004 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 YIPF4Q9BSR8 244 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 BTBD2Q9BX70 525 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 TMEM120AQ9BXJ8 343 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 TSPAN10Q9H1Z9 355 aaPredicted RBP17.06■□□□□ 0.32
PTCD3-217ENST00000488801 SLC6A13Q9NSD5 602 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 QPCTLQ9NXS2 382 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 FLRT3Q9NZU0 649 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 PCDHGB4Q9UN71 923 aa17.06■□□□□ 0.32
PTCD3-217ENST00000488801 MPDZO75970 2070 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 NPIPA5E9PKD4 350 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 ACOT7O00154 380 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 ASNA1O43681 348 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 KCNH1O95259 989 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 C1QCP02747 245 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 RFPL3SP0C7P2 107 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 ZCCHC18P0CG32 403 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 TROVE2P10155 538 aaKnown RBP eCLIP17.05■□□□□ 0.32
PTCD3-217ENST00000488801 CD1EP15812 388 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 LCN1P31025 176 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 EVI2BP34910 448 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 KRT20P35900 424 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 PSMD4P55036 377 aaKnown RBP17.05■□□□□ 0.32
PTCD3-217ENST00000488801 SPDYE7PQ495Y7 208 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 METTL21CQ5VZV1 264 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 FGD2Q7Z6J4 655 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 ZAR1Q86SH2 424 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 COX18Q8N8Q8 333 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 CDS1Q92903 461 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 VPS33AQ96AX1 596 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 OTUB1Q96FW1 271 aaPredicted RBP17.05■□□□□ 0.32
PTCD3-217ENST00000488801 SLC35G5Q96KT7 338 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 OR7D2Q96RA2 312 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 METTL7AQ9H8H3 244 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 GALNT9Q9HCQ5 603 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 SEC14L3Q9UDX4 400 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 MRTO4Q9UKD2 239 aaKnown RBP17.05■□□□□ 0.32
PTCD3-217ENST00000488801 NPIPA1Q9UND3 350 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 ZNF835Q9Y2P0 537 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 WIF1Q9Y5W5 379 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 KCNE3Q9Y6H6 103 aa17.05■□□□□ 0.32
PTCD3-217ENST00000488801 FAM166BA8MTA8 275 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 UNC5CO95185 931 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 CPSF4O95639 269 aaKnown RBP17.04■□□□□ 0.32
PTCD3-217ENST00000488801 VIMP08670 466 aaKnown RBP17.04■□□□□ 0.32
PTCD3-217ENST00000488801 CAPN3P20807 821 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 MAGEA5P43359 124 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 MVDP53602 400 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 KCNK10P57789 538 aa17.04■□□□□ 0.32
PTCD3-217ENST00000488801 RPS26P62854 115 aaKnown RBP17.04■□□□□ 0.32
PTCD3-217ENST00000488801 PPIAP62937 165 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms