RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 FOXI3A8MTJ6 420 aaPredicted RBP3.36□□□□□ -1.87
ITGB1-214ENST00000488427 ANHXE9PGG2 379 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 DUSP11O75319 330 aaKnown RBP3.36□□□□□ -1.87
ITGB1-214ENST00000488427 FRAT2O75474 233 aaPredicted RBP3.36□□□□□ -1.87
ITGB1-214ENST00000488427 RENP00797 406 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 MELTFP08582 738 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 SNRPCP09234 159 aaKnown RBP3.36□□□□□ -1.87
ITGB1-214ENST00000488427 CT45A8P0DMV1 189 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 CT45A9P0DMV2 189 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 KCNJ1P48048 391 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 GSK3BP49841 420 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 ROR1Q01973 937 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 CSTF1Q05048 431 aaKnown RBP3.36□□□□□ -1.87
ITGB1-214ENST00000488427 MFGE8Q08431 387 aaPredicted RBP3.36□□□□□ -1.87
ITGB1-214ENST00000488427 HSPA14Q0VDF9 509 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 SPHARQ15513 63 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 CT45A2Q5DJT8 189 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 PODNL1Q6PEZ8 512 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 SIGLEC15Q6ZMC9 328 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 CCDC83Q8IWF9 413 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 NUP93Q8N1F7 819 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 NKAIN3Q8N8D7 197 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 GPR148Q8TDV2 347 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 PRCCQ92733 491 aaPredicted RBP3.36□□□□□ -1.87
ITGB1-214ENST00000488427 ESAMQ96AP7 390 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 C16orf58Q96GQ5 468 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 SERAC1Q96JX3 654 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 ERGIC2Q96RQ1 377 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 RAB40CQ96S21 281 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 TESK2Q96S53 571 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 SSX3Q99909 188 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 ZDHHC6Q9H6R6 413 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 AMBNQ9NP70 447 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.36□□□□□ -1.87
ITGB1-214ENST00000488427 ABCC13Q9NSE7 274 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 ARGLU1Q9NWB6 273 aaPredicted RBP3.36□□□□□ -1.87
ITGB1-214ENST00000488427 TRPC4Q9UBN4 977 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 EIF3KQ9UBQ5 218 aaKnown RBP3.36□□□□□ -1.87
ITGB1-214ENST00000488427 DNAJB9Q9UBS3 223 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 RTTNQ86VV8 2226 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 NBASA2RRP1 2371 aa3.36□□□□□ -1.87
ITGB1-214ENST00000488427 FER1L5A0AVI2 2057 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 ATG2BQ96BY7 2078 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 MUC22E2RYF6 1773 aaPredicted RBP3.35□□□□□ -1.87
ITGB1-214ENST00000488427 JMJD1CQ15652 2540 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 TRBV5-4A0A0C4DH59 114 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 ATP6AP2A0A1C7CYW4 349 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 TMEM129A0AVI4 362 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 ZNF840PA6NDX5 716 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 RPL37AP8A6NKH3 93 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 CACNB4O00305 520 aaPredicted RBP3.35□□□□□ -1.87
ITGB1-214ENST00000488427 ZNF263O14978 683 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 TTI1O43156 1089 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 CNMDO75829 334 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 CABYRO75952 493 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 FHP07954 510 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 IQCF3P0C7M6 154 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 MBL2P11226 248 aaPredicted RBP3.35□□□□□ -1.87
ITGB1-214ENST00000488427 ODC1P11926 461 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 FERP16591 822 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 CTNNA1P35221 906 aaKnown RBP3.35□□□□□ -1.87
ITGB1-214ENST00000488427 CTNNB1P35222 781 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 EMC2Q15006 297 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 Q1RN00 199 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 ATAD3CQ5T2N8 411 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 CAPN13Q6MZZ7 669 aaPredicted RBP3.35□□□□□ -1.87
ITGB1-214ENST00000488427 APOBEC3HQ6NTF7 200 aaKnown RBP3.35□□□□□ -1.87
ITGB1-214ENST00000488427 NEPROQ6NW34 567 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 CXCL17Q6UXB2 119 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 HIPK1Q86Z02 1210 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 TMEM126BQ8IUX1 230 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 SYCP3Q8IZU3 236 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 C19orf43Q9BQ61 176 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 ZNF559Q9BR84 538 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 CCDC28BQ9BUN5 200 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 NT5DC2Q9H857 520 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 IL1RAPL2Q9NP60 686 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 ZNF107Q9UII5 783 aaPredicted RBP3.35□□□□□ -1.87
ITGB1-214ENST00000488427 DUSP12Q9UNI6 340 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 HIVEP3Q5T1R4 2406 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 PI4KAP42356 2102 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 MGAQ8IWI9 3026 aa3.35□□□□□ -1.87
ITGB1-214ENST00000488427 STAB1Q9NY15 2570 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 MED13Q9UHV7 2174 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 TEX48A0A1B0GUV7 120 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 A8MU10 97 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 KLLNB2CW77 178 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 SRRM5B3KS81 715 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 PHF1O43189 567 aaPredicted RBP3.34□□□□□ -1.87
ITGB1-214ENST00000488427 ZNF354AO60765 605 aaPredicted RBP3.34□□□□□ -1.87
ITGB1-214ENST00000488427 ANXA9O76027 345 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 KBTBD11O94819 623 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 OR6B1O95007 311 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 MMP1P03956 469 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 FCGR3AP08637 254 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 OR9G9P0C7N8 305 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 EZRP15311 586 aaKnown RBP3.34□□□□□ -1.87
ITGB1-214ENST00000488427 NAAAQ02083 359 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 ODF2Q5BJF6 829 aa3.34□□□□□ -1.87
ITGB1-214ENST00000488427 LINC00242Q5T6M2 205 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms