RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 EPS15P42566 896 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 MAGEB1P43366 347 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 GSSP48637 474 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 CAMLGP49069 296 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 CLCN4P51793 760 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 NME5P56597 212 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 B2MP61769 119 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 BTG1P62324 171 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 HTD2P86397 168 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 NPRL3Q12980 569 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 ZNF177Q13360 481 aaPredicted RBP3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 KRT31Q15323 416 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 SPA17Q15506 151 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 KRT71Q3SY84 523 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 BEND3Q5T5X7 828 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 CTRB2Q6GPI1 263 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 SLC27A4Q6P1M0 643 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 UGT2A3Q6UWM9 527 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 C17orf107Q6ZR85 190 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 FRA10AC1Q70Z53 315 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 ECHDC2Q86YB7 292 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 TMEM126BQ8IUX1 230 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 MMAAQ8IVH4 418 aaKnown RBP3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 ZC3H3Q8IXZ2 948 aaKnown RBP3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 SLC22A15Q8IZD6 547 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 TEX26Q8N6G2 289 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 Q8NBF4 154 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 OR52B6Q8NGF0 335 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 C11orf45Q8TAV5 145 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 SUN5Q8TC36 379 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 NELFBQ8WX92 580 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 GTF3AQ92664 365 aaKnown RBP3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 RFT1Q96AA3 541 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 ULK4Q96C45 1275 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 C5orf30Q96GV9 206 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 COG3Q96JB2 828 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 MAGEB18Q96M61 343 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 ZNF641Q96N77 438 aaPredicted RBP3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 ERGIC2Q96RQ1 377 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 PCDHB18PQ96TA0 734 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 CHP1Q99653 195 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 DHRS9Q9BPW9 319 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 OVOL2Q9BRP0 275 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 RIOK1Q9BRS2 568 aaKnown RBP3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 SPXQ9BT56 116 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 LRRC61Q9BV99 259 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 NDEL1Q9GZM8 345 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 C1orf21Q9H246 121 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 MTIF3Q9H2K0 278 aaKnown RBP3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 NHEJ1Q9H9Q4 299 aaPredicted RBP3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 MAGEF1Q9HAY2 307 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 CD209Q9NNX6 404 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 TAS2R3Q9NYW6 316 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 ACTR3BQ9P1U1 418 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 MUTYHQ9UIF7 546 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 PIN4Q9Y237 131 aaKnown RBP3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 STK38LQ9Y2H1 464 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 UTP11Q9Y3A2 253 aaKnown RBP3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 MOB4Q9Y3A3 225 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 CRB1P82279 1406 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 NRKQ7Z2Y5 1582 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 CPDO75976 1380 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 SLIT3O75094 1523 aa3.24□□□□□ -1.89
ECHDC1-217ENST00000488087 CLRN2A0PK11 232 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 GLTPD2A6NH11 291 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 SYCE1LA8MT33 242 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 K7EQD1 137 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 M0QX08 132 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 CASQ2O14958 399 aaPredicted RBP3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 XPO1O14980 1071 aaKnown RBP3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 RGS16O15492 202 aaPredicted RBP3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 AQP9O43315 295 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 RAD51CO43502 376 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 LRCH4O75427 683 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 PRDM1O75626 825 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 SULT1C4O75897 302 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 AKAP3O75969 853 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 UFL1O94874 794 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 KLHL2O95198 593 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 IL1BP01584 269 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 SHBGP04278 402 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 ALOX5P09917 674 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 UQCRBP14927 111 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 CD9P21926 228 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 PRKACBP22694 351 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 IL32P24001 234 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 RPA1P27694 616 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 SRD5A2P31213 254 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 GPR183P32249 361 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 FEN1P39748 380 aaKnown RBP3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 CDK9P50750 372 aaKnown RBP3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 TKTL1P51854 596 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 CASP9P55211 416 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 FKBP1BP68106 108 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 NOP14P78316 857 aaKnown RBP3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 LRRC63Q05C16 580 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 RIPPLY1Q0D2K3 151 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 LCP2Q13094 533 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 NFATC2Q13469 925 aa3.23□□□□□ -1.89
ECHDC1-217ENST00000488087 MED21Q13503 144 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms