RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 SLC48A1Q6P1K1 146 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 ZNF676Q8N7Q3 588 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 OR6Q1Q8NGQ2 317 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 ELSPBP1Q96BH3 223 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 MRPL38Q96DV4 380 aaKnown RBP11.1□□□□□ -0.63
TRA2B-214ENST00000487615 DPH1Q9BZG8 443 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 QRSL1Q9H0R6 528 aaKnown RBP11.1□□□□□ -0.63
TRA2B-214ENST00000487615 SLC6A17Q9H1V8 727 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 NAALAD2Q9Y3Q0 740 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 ZNF217O75362 1048 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 ITGA10O75578 1167 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 KLHL18O94889 574 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 CCKBRP32239 447 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 MNDAP41218 407 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 ADPRHP54922 357 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 PITPNAQ00169 270 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 TNFRSF17Q02223 184 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 RPL6Q02878 288 aaKnown RBP11.1□□□□□ -0.63
TRA2B-214ENST00000487615 GPR19Q15760 415 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 PYCR3Q53H96 274 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 ARHGAP11AQ6P4F7 1023 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 DCDC5Q6ZRR9 648 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 CPOQ8IVL8 374 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 RBM12BQ8IXT5 1001 aaKnown RBP11.1□□□□□ -0.63
TRA2B-214ENST00000487615 TOE1Q96GM8 510 aaKnown RBP11.1□□□□□ -0.63
TRA2B-214ENST00000487615 HDHD5Q9BXW7 423 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 SPNS1Q9H2V7 528 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 WASH6PQ9NQA3 447 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 GNG8Q9UK08 70 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 B3GNT3Q9Y2A9 372 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 CCL27Q9Y4X3 112 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 CEP290O15078 2479 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 FUOMA2VDF0 154 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 ZNF670-ZNF695F2Z2N8 137 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 BOLA2-SMG1P6H3BVE0 249 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 ATP6V1G1O75348 118 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 GPR75O95800 540 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 CD2P06729 351 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 ARFIP1P53367 373 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 AP3S2P59780 193 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 RAB40BQ12829 278 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 PUS10Q3MIT2 529 aaKnown RBP11.1□□□□□ -0.63
TRA2B-214ENST00000487615 ENTPD8Q5MY95 495 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 DCST2Q5T1A1 773 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 CCNJQ5T5M9 372 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 SAXO2Q658L1 398 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 USP51Q70EK9 711 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 RELTQ969Z4 430 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 SGTBQ96EQ0 304 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 DUSP21Q9H596 190 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 ERVK13-1Q9NX77 482 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 PCDHGA4Q9Y5G9 962 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 CSNK1G3Q9Y6M4 447 aa11.1□□□□□ -0.63
TRA2B-214ENST00000487615 CPED1A4D0V7 1026 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 SLC35F4A4IF30 521 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 H0YGG7 62 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 SGK494L7N484 410 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 OR2B3O76000 313 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 PYCR1P32322 319 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 ARF3P61204 181 aaPredicted RBP11.09□□□□□ -0.63
TRA2B-214ENST00000487615 HNRNPKP61978 463 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRA2B-214ENST00000487615 GRM7Q14831 915 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 CCBE1Q6UXH8 406 aaPredicted RBP11.09□□□□□ -0.63
TRA2B-214ENST00000487615 CAMKMTQ7Z624 323 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 SLC44A3Q8N4M1 653 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 TMEM239Q8WW34 195 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 ADAD1Q96M93 576 aaKnown RBP11.09□□□□□ -0.63
TRA2B-214ENST00000487615 TTTY10Q9BZA0 68 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 MED28Q9H204 178 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 DDX31Q9H8H2 851 aaKnown RBP11.09□□□□□ -0.63
TRA2B-214ENST00000487615 ACER3Q9NUN7 267 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 VNN3Q9NY84 501 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 CDH10Q9Y6N8 788 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 SERTM1A2A2V5 107 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 TRIM3O75382 744 aaPredicted RBP11.09□□□□□ -0.63
TRA2B-214ENST00000487615 RPP14O95059 124 aaKnown RBP11.09□□□□□ -0.63
TRA2B-214ENST00000487615 ZNF823P16415 610 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 UGT2B7P16662 529 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 INAVAQ3KP66 663 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 TCTE1Q5JU00 501 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 TMEM31Q5JXX7 168 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 ASB18Q6ZVZ8 466 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 RLIMQ9NVW2 624 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 TMPRSS11EQ9UL52 423 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 ZFR2Q9UPR6 939 aaKnown RBP11.09□□□□□ -0.63
TRA2B-214ENST00000487615 BAIAP2Q9UQB8 552 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 PCDHGB6Q9Y5F9 930 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 A0A0A6YYC8 382 aaPredicted RBP11.09□□□□□ -0.63
TRA2B-214ENST00000487615 AGAP5A6NIR3 686 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 I3L1I5 382 aaPredicted RBP11.09□□□□□ -0.63
TRA2B-214ENST00000487615 PRAMEF2O60811 474 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 PTHP01270 115 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 WNT3P56703 355 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 TSPAN31Q12999 210 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 SHHQ15465 462 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 ZCCHC12Q6PEW1 402 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 Q8N9G6 341 aaPredicted RBP11.09□□□□□ -0.63
TRA2B-214ENST00000487615 OR6T1Q8NGN1 323 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 MS4A6EQ96DS6 147 aa11.09□□□□□ -0.63
TRA2B-214ENST00000487615 DMRTB1Q96MA1 342 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms