RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, human

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHMP3-208	ENST00000486404	PLCZ1	Q86YW0	608 aa		11.75	□□□□□ -0.53
CHMP3-208	ENST00000486404	KIRREL3	Q8IZU9	778 aa		11.75	□□□□□ -0.53
CHMP3-208	ENST00000486404	ANKRD42	Q8N9B4	389 aa		11.75	□□□□□ -0.53
CHMP3-208	ENST00000486404	CEP70	Q8NHQ1	597 aa		11.75	□□□□□ -0.53
CHMP3-208	ENST00000486404	GPR151	Q8TDV0	419 aa		11.75	□□□□□ -0.53
CHMP3-208	ENST00000486404	JADE3	Q92613	823 aa		11.75	□□□□□ -0.53
CHMP3-208	ENST00000486404	ABTB1	Q969K4	478 aa	Predicted RBP	11.75	□□□□□ -0.53
CHMP3-208	ENST00000486404	CHMP6	Q96FZ7	201 aa		11.75	□□□□□ -0.53
CHMP3-208	ENST00000486404	PGM2	Q96G03	612 aa		11.75	□□□□□ -0.53
CHMP3-208	ENST00000486404	RMND5B	Q96G75	393 aa	Predicted RBP	11.75	□□□□□ -0.53
CHMP3-208	ENST00000486404	LMF2	Q9BU23	707 aa	Known RBP	11.75	□□□□□ -0.53
CHMP3-208	ENST00000486404	UGT2B28	Q9BY64	529 aa		11.75	□□□□□ -0.53
CHMP3-208	ENST00000486404	OR2B2	Q9GZK3	357 aa		11.75	□□□□□ -0.53
CHMP3-208	ENST00000486404	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.75	□□□□□ -0.53
CHMP3-208	ENST00000486404	ZDHHC2	Q9UIJ5	367 aa		11.75	□□□□□ -0.53
CHMP3-208	ENST00000486404	EIF3L	Q9Y262	564 aa	Known RBP	11.75	□□□□□ -0.53
CHMP3-208	ENST00000486404	ACTL7B	Q9Y614	415 aa		11.75	□□□□□ -0.53
CHMP3-208	ENST00000486404	DOCK7	Q96N67	2140 aa		11.75	□□□□□ -0.53
CHMP3-208	ENST00000486404		A0A0G2JNJ9	132 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404		H0Y3Z8	333 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	SNUPN	O95149	360 aa	Known RBP	11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	ACTL6A	O96019	429 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	EFNA1	P20827	205 aa	Predicted RBP	11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	GABRA3	P34903	492 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	RCAN2	Q14206	197 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	NHSL2	Q5HYW2	709 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	C6orf136	Q5SQH8	315 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	CPTP	Q5TA50	214 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	RIPPLY2	Q5TAB7	128 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	HHAT	Q5VTY9	493 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	IL23R	Q5VWK5	629 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	RTL6	Q6ICC9	239 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	ENPP6	Q6UWR7	440 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	LACC1	Q8IV20	430 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	ZNF781	Q8N8C0	355 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	CDRT4	Q8N9R6	151 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	NUP43	Q8NFH3	380 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	OR7A2P	Q8NGA2	310 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	LILRB4	Q8NHJ6	448 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	SLC9A6	Q92581	669 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	PPP1R36	Q96LQ0	422 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	C3orf30	Q96M34	536 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	SFXN2	Q96NB2	322 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	PRPF18	Q99633	342 aa	Known RBP	11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	TIMP4	Q99727	224 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	TBL1XR1	Q9BZK7	514 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	SDHAF3	Q9NRP4	125 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	ZCCHC3	Q9NUD5	404 aa	Known RBP	11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	FAM120C	Q9NX05	1096 aa	Known RBP	11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	TAS2R10	Q9NYW0	307 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	NOP53	Q9NZM5	478 aa	Known RBP	11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404		Q9UFV3	132 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	SNX8	Q9Y5X2	465 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	ABCA12	Q86UK0	2595 aa		11.74	□□□□□ -0.53
CHMP3-208	ENST00000486404	HSPB2	A8KAH6	182 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	AHRR	A9YTQ3	701 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	EMC8	O43402	210 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	IL33	O95760	270 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	BMP7	P18075	431 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	PRPS1L1	P21108	318 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	BGN	P21810	368 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	SRD5A2	P31213	254 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	ADH7	P40394	386 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	SLC1A6	P48664	564 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	PRIM2	P49643	509 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	GAB1	Q13480	694 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	HSPB2	Q16082	182 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	SLC25A35	Q3KQZ1	300 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	DCST1	Q5T197	706 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	VASN	Q6EMK4	673 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	OR5M10	Q6IEU7	315 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	AAGAB	Q6PD74	315 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	COX18	Q8N8Q8	333 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	WDSUB1	Q8N9V3	476 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	OR6Y1	Q8NGX8	325 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	PIK3R3	Q92569	461 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	MED12	Q93074	2177 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	TRIB1	Q96RU8	372 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	UCK2	Q9BZX2	261 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	PRDM14	Q9GZV8	571 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	KIAA1549	Q9HCM3	1950 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	ATP6V1H	Q9UI12	483 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	FBXL2	Q9UKC9	423 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404	RAP2C	Q9Y3L5	183 aa		11.73	□□□□□ -0.53
CHMP3-208	ENST00000486404		A0A1W2PRB8	838 aa		11.72	□□□□□ -0.53
CHMP3-208	ENST00000486404	GXYLT2	A0PJZ3	443 aa		11.72	□□□□□ -0.53
CHMP3-208	ENST00000486404	DVL2	O14641	736 aa		11.72	□□□□□ -0.53
CHMP3-208	ENST00000486404	CFLAR	O15519	480 aa		11.72	□□□□□ -0.53
CHMP3-208	ENST00000486404	ITM2A	O43736	263 aa		11.72	□□□□□ -0.53
CHMP3-208	ENST00000486404	UTS2	O95399	124 aa		11.72	□□□□□ -0.53
CHMP3-208	ENST00000486404	IL2RA	P01589	272 aa		11.72	□□□□□ -0.53
CHMP3-208	ENST00000486404	ALOX5	P09917	674 aa		11.72	□□□□□ -0.53
CHMP3-208	ENST00000486404	PRF1	P14222	555 aa		11.72	□□□□□ -0.53
CHMP3-208	ENST00000486404	DPP4	P27487	766 aa		11.72	□□□□□ -0.53
CHMP3-208	ENST00000486404	MSX1	P28360	303 aa		11.72	□□□□□ -0.53
CHMP3-208	ENST00000486404	SSTR2	P30874	369 aa		11.72	□□□□□ -0.53
CHMP3-208	ENST00000486404	SOAT1	P35610	550 aa		11.72	□□□□□ -0.53
CHMP3-208	ENST00000486404	FRK	P42685	505 aa	Predicted RBP	11.72	□□□□□ -0.53
CHMP3-208	ENST00000486404	KIR3DL1	P43629	444 aa		11.72	□□□□□ -0.53
CHMP3-208	ENST00000486404	SRY	Q05066	204 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms