RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 TNIP2Q8NFZ5 429 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 OR56A1Q8NGH5 318 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 OR52N2Q8NGI0 321 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 ZNF675Q8TD23 568 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 PTPMT1Q8WUK0 201 aaPredicted RBP15.72■□□□□ 0.11
VIM-205ENST00000485947 NCLNQ969V3 563 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 ASB9Q96DX5 294 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 NEURL3Q96EH8 262 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 FAM120BQ96EK7 910 aaKnown RBP15.72■□□□□ 0.11
VIM-205ENST00000485947 AURKBQ96GD4 344 aaPredicted RBP15.72■□□□□ 0.11
VIM-205ENST00000485947 RBM18Q96H35 190 aaKnown RBP15.72■□□□□ 0.11
VIM-205ENST00000485947 ART5Q96L15 291 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 GPR137Q96N19 417 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 FRMD6Q96NE9 622 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 KCTD14Q9BQ13 255 aaPredicted RBP15.72■□□□□ 0.11
VIM-205ENST00000485947 C3orf14Q9HBI5 128 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 ANKRD10Q9NXR5 420 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 BCAP29Q9UHQ4 241 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 SNX8Q9Y5X2 465 aa15.72■□□□□ 0.11
VIM-205ENST00000485947 SVILO95425 2214 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 PLOD2O00469 737 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 EMC8O43402 210 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 ITGA10O75578 1167 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 STAMBPO95630 424 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 MST1P26927 711 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 STT3AP46977 705 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 CCT3P49368 545 aaKnown RBP15.71■□□□□ 0.11
VIM-205ENST00000485947 SSR4P51571 173 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 PRR5P85299 388 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 TRIM25Q14258 630 aaKnown RBP15.71■□□□□ 0.11
VIM-205ENST00000485947 ZNF750Q32MQ0 723 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 C1orf146Q5VVC0 180 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 ERICH5Q6P6B1 374 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 CALHM3Q86XJ0 350 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 OR4N5Q8IXE1 308 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 ST13P4Q8IZP2 240 aaPredicted RBP15.71■□□□□ 0.11
VIM-205ENST00000485947 RNF148Q8N7C7 305 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 OR9A2Q8NGT5 310 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 CCDC124Q96CT7 223 aaKnown RBP15.71■□□□□ 0.11
VIM-205ENST00000485947 IKZF5Q9H5V7 419 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 TIMMDC1Q9NPL8 285 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 KLHL1Q9NR64 748 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 MYOTQ9UBF9 498 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 COPS7AQ9UBW8 275 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 ZNF223Q9UK11 482 aaPredicted RBP15.71■□□□□ 0.11
VIM-205ENST00000485947 POMPQ9Y244 141 aa15.71■□□□□ 0.11
VIM-205ENST00000485947 ZGRF1Q86YA3 2104 aa15.7■□□□□ 0.1
VIM-205ENST00000485947 A0A087WV62 115 aa15.7■□□□□ 0.1
VIM-205ENST00000485947 A0A1W2PS29 197 aa15.7■□□□□ 0.1
VIM-205ENST00000485947 C17orf105B2RV13 164 aa15.7■□□□□ 0.1
VIM-205ENST00000485947 TNNI3P19429 210 aa15.7■□□□□ 0.1
VIM-205ENST00000485947 CA7P43166 264 aa15.7■□□□□ 0.1
VIM-205ENST00000485947 ANXA11P50995 505 aaKnown RBP15.7■□□□□ 0.1
VIM-205ENST00000485947 RGNQ15493 299 aa15.7■□□□□ 0.1
VIM-205ENST00000485947 FXNQ16595 210 aa15.7■□□□□ 0.1
VIM-205ENST00000485947 ZNF468Q5VIY5 522 aaPredicted RBP15.7■□□□□ 0.1
VIM-205ENST00000485947 OR2T12Q8NG77 320 aa15.7■□□□□ 0.1
VIM-205ENST00000485947 OR10A6Q8NH74 314 aa15.7■□□□□ 0.1
VIM-205ENST00000485947 OR5AK3PQ8NH89 298 aa15.7■□□□□ 0.1
VIM-205ENST00000485947 ELP4Q96EB1 424 aa15.7■□□□□ 0.1
VIM-205ENST00000485947 SGCZQ96LD1 299 aa15.7■□□□□ 0.1
VIM-205ENST00000485947 ZNF583Q96ND8 569 aa15.7■□□□□ 0.1
VIM-205ENST00000485947 DGAT2Q96PD7 388 aa15.7■□□□□ 0.1
VIM-205ENST00000485947 TRIM8Q9BZR9 551 aa15.7■□□□□ 0.1
VIM-205ENST00000485947 ZCCHC3Q9NUD5 404 aaKnown RBP15.7■□□□□ 0.1
VIM-205ENST00000485947 NTMQ9P121 344 aa15.7■□□□□ 0.1
VIM-205ENST00000485947 PACSIN3Q9UKS6 424 aa15.7■□□□□ 0.1
VIM-205ENST00000485947 LRBAP50851 2863 aa15.7■□□□□ 0.1
VIM-205ENST00000485947 OR10H2O60403 315 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 PLOD3O60568 738 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 RNF224P0DH78 156 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 ZNF24P17028 368 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 TCN1P20061 433 aaPredicted RBP15.69■□□□□ 0.1
VIM-205ENST00000485947 NT5EP21589 574 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 GZMMP51124 257 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 MVDP53602 400 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 ELF3P78545 371 aaPredicted RBP15.69■□□□□ 0.1
VIM-205ENST00000485947 ID2Q02363 134 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 PRICKLE4Q2TBC4 344 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 ZNF628Q5EBL2 1059 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 TMEM107Q6UX40 140 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 ANGPTL8Q6UXH0 198 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 Q6ZPB1 254 aaPredicted RBP15.69■□□□□ 0.1
VIM-205ENST00000485947 C6orf120Q7Z4R8 191 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.69■□□□□ 0.1
VIM-205ENST00000485947 ZNF227Q86WZ6 799 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 SIAH3Q8IW03 269 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 SLC34A3Q8N130 599 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 EID3Q8N140 333 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 CYP4Z2PQ8N1L4 340 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 GHDCQ8N2G8 530 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 NUBPLQ8TB37 319 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 SLC2A12Q8TD20 617 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 JADE3Q92613 823 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 REXO5Q96IC2 774 aaKnown RBP15.69■□□□□ 0.1
VIM-205ENST00000485947 SLC35G5Q96KT7 338 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 TRIM15Q9C019 465 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 THUMPD1Q9NXG2 353 aaKnown RBP15.69■□□□□ 0.1
VIM-205ENST00000485947 MAGEL2Q9UJ55 1249 aa15.69■□□□□ 0.1
VIM-205ENST00000485947 ZNF835Q9Y2P0 537 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms