RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 ZNF597Q96LX8 424 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 OR7D2Q96RA2 312 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 BARD1Q99728 777 aaKnown RBP10.86□□□□□ -0.67
HPS4-214ENST00000485842 TTTY12Q9BZ98 90 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 SERHL2Q9H4I8 314 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 RABEP2Q9H5N1 569 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 ZNF385DQ9H6B1 395 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 PROK2Q9HC23 129 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 GALNT9Q9HCQ5 603 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 SERHLQ9NQF3 203 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 KLHL14Q9P2G3 628 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 BOKQ9UMX3 212 aaPredicted RBP10.86□□□□□ -0.67
HPS4-214ENST00000485842 KCNE3Q9Y6H6 103 aa10.86□□□□□ -0.67
HPS4-214ENST00000485842 ANKRD33BA6NCL7 494 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 C2orf72A6NCS6 295 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 ANKUB1A6NFN9 424 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 LRRC3CA6NJW4 275 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 GNB5O14775 395 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 SCO2O43819 266 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 CDC40O60508 579 aaKnown RBP eCLIP10.85□□□□□ -0.67
HPS4-214ENST00000485842 WISP2O76076 250 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 KCNK2O95069 426 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 UNC5CO95185 931 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 UTS2O95399 124 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 IL33O95760 270 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 EDN3P14138 238 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 CD1EP15812 388 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 CAPN3P20807 821 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 MATN1P21941 496 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 GNLYP22749 145 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 LSP1P33241 339 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 MAN2A2P49641 1150 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 KHKP50053 298 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 TDGF1P3P51864 188 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 PPIAP62937 165 aaKnown RBP10.85□□□□□ -0.67
HPS4-214ENST00000485842 FOXO1Q12778 655 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 GTDC1Q4AE62 458 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 SAXO2Q658L1 398 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 BLOC1S3Q6QNY0 202 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 GFRALQ6UXV0 394 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 PACS2Q86VP3 889 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 SLC22A16Q86VW1 577 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 SIAH3Q8IW03 269 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 PNPT1Q8TCS8 783 aaKnown RBP10.85□□□□□ -0.67
HPS4-214ENST00000485842 C10orf82Q8WW14 230 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 NEURL3Q96EH8 262 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 STACQ99469 402 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 BTBD2Q9BX70 525 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 ANGPTL4Q9BY76 406 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 NSRP1Q9H0G5 558 aaKnown RBP10.85□□□□□ -0.67
HPS4-214ENST00000485842 DEFB127Q9H1M4 99 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 OR51I1Q9H343 314 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 PIGUQ9H490 435 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 IL1RL2Q9HB29 575 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 DUSP22Q9NRW4 184 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 SLC6A13Q9NSD5 602 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 FLRT3Q9NZU0 649 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 SEC14L3Q9UDX4 400 aa10.85□□□□□ -0.67
HPS4-214ENST00000485842 TRIM3O75382 744 aaPredicted RBP10.84□□□□□ -0.67
HPS4-214ENST00000485842 SNX4O95219 450 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 C1QCP02747 245 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 RFPL3SP0C7P2 107 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 OR12D1P0DN82 309 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 ATP6V1C1P21283 382 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 EVI2BP34910 448 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 PTGDSP41222 190 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 MAGEA5P43359 124 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 HSF1Q00613 529 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 STX5Q13190 355 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 UBAP2LQ14157 1087 aaKnown RBP10.84□□□□□ -0.67
HPS4-214ENST00000485842 GRAMD1BQ3KR37 738 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 DCST2Q5T1A1 773 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 METTL21CQ5VZV1 264 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 SLC30A6Q6NXT4 461 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 ZAR1Q86SH2 424 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 RNF130Q86XS8 419 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 TMEM251Q8N6I4 163 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 ST6GALNAC3Q8NDV1 305 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 OR52N2Q8NGI0 321 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 GTF2H4Q92759 462 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 RAB8BQ92930 207 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 AURKBQ96GD4 344 aaPredicted RBP10.84□□□□□ -0.67
HPS4-214ENST00000485842 GPR137Q96N19 417 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 ELAC2Q9BQ52 826 aaKnown RBP10.84□□□□□ -0.67
HPS4-214ENST00000485842 ZFP64Q9NPA5 681 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 FBXO34Q9NWN3 711 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 GIN1Q9NXP7 522 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 B4GALT7Q9UBV7 327 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 PCDHGB3Q9Y5G1 929 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 WIF1Q9Y5W5 379 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 PRRC2CQ9Y520 2896 aaKnown RBP10.84□□□□□ -0.67
HPS4-214ENST00000485842 NCKAP5O14513 1909 aa10.84□□□□□ -0.67
HPS4-214ENST00000485842 NPIPA5A0A0B4J1W7 369 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 C17orf51A8MQB3 221 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 NPIPA7E9PJI5 369 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 ANGPT2O15123 496 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 ZNHIT1O43257 154 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 ASNA1O43681 348 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 PDE9AO76083 593 aa10.83□□□□□ -0.68
HPS4-214ENST00000485842 GLSO94925 669 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms