RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 DOHHQ9BU89 302 aa10.9□□□□□ -0.66
APTX-227ENST00000485479 RMND5AQ9H871 391 aa10.9□□□□□ -0.66
APTX-227ENST00000485479 METTL7AQ9H8H3 244 aa10.9□□□□□ -0.66
APTX-227ENST00000485479 SH2D2AQ9NP31 389 aa10.9□□□□□ -0.66
APTX-227ENST00000485479 TIMMDC1Q9NPL8 285 aa10.9□□□□□ -0.66
APTX-227ENST00000485479 TUBA8Q9NY65 449 aaPredicted RBP10.9□□□□□ -0.66
APTX-227ENST00000485479 KLRF1Q9NZS2 232 aa10.9□□□□□ -0.66
APTX-227ENST00000485479 ANAPC2Q9UJX6 822 aa10.9□□□□□ -0.66
APTX-227ENST00000485479 CNOT11Q9UKZ1 510 aaKnown RBP10.9□□□□□ -0.66
APTX-227ENST00000485479 CENPVL1A0A0U1RR11 272 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 PRAMEF27A3QJZ7 478 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 ANGPT2O15123 496 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 TO15178 435 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 HS6ST1O60243 411 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 UNC5CO95185 931 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 ZIC2O95409 532 aaPredicted RBP10.89□□□□□ -0.67
APTX-227ENST00000485479 NUDT7P0C024 238 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 RFPL3SP0C7P2 107 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 ETFAP13804 333 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 KRT20P35900 424 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 CASP3P42574 277 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 PRIM2P49643 509 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 TMED10P49755 219 aaKnown RBP10.89□□□□□ -0.67
APTX-227ENST00000485479 HSF1Q00613 529 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 SLC15A4Q8N697 577 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 TMEM178AQ8NBL3 297 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 OR2M7Q8NG81 312 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 ZFP90Q8TF47 636 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 NEURL3Q96EH8 262 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 QRSL1Q9H0R6 528 aaKnown RBP10.89□□□□□ -0.67
APTX-227ENST00000485479 TPT1P8Q9HAU6 139 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 SACM1LQ9NTJ5 587 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 FREM3P0C091 2139 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 MED12Q93074 2177 aa10.89□□□□□ -0.67
APTX-227ENST00000485479 A0A1W2PP18 115 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 HMGN4O00479 90 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 GNB5O14775 395 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 FCMRO60667 390 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 PDE9AO76083 593 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 KCNH1O95259 989 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 SNRPB2P08579 225 aaKnown RBP10.88□□□□□ -0.67
APTX-227ENST00000485479 CELA3AP09093 270 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 HOXB9P17482 250 aaPredicted RBP10.88□□□□□ -0.67
APTX-227ENST00000485479 MST1P26927 711 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 PTGDSP41222 190 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 CRATP43155 626 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 MVDP53602 400 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 SELPLGQ14242 412 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 DECR1Q16698 335 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 EXOSC6Q5RKV6 272 aaKnown RBP10.88□□□□□ -0.67
APTX-227ENST00000485479 DCST2Q5T1A1 773 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 APOOLQ6UXV4 268 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 HPS6Q86YV9 775 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 GOLM1Q8NBJ4 401 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 OR4C3Q8NH37 302 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 SPPL2AQ8TCT8 520 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 HOXB13Q92826 284 aaPredicted RBP10.88□□□□□ -0.67
APTX-227ENST00000485479 MAL2Q969L2 176 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 TNFRSF10DQ9UBN6 386 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 NDUFAF1Q9Y375 327 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 CAPN7Q9Y6W3 813 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 PCNX3Q9H6A9 2034 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 SHOX2O60902 331 aaPredicted RBP10.88□□□□□ -0.67
APTX-227ENST00000485479 CPA2P48052 419 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 MTPNP58546 118 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 POU6F2P78424 691 aaPredicted RBP10.88□□□□□ -0.67
APTX-227ENST00000485479 SYPL1Q16563 259 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 GRAMD1BQ3KR37 738 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 CYP27C1Q4G0S4 372 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 REP15Q6BDI9 236 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 FAM180AQ6UWF9 173 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 PIGWQ7Z7B1 504 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 DHDDSQ86SQ9 333 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 MARCH3Q86UD3 253 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 TRIML2Q8N7C3 387 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 ZNF614Q8N883 585 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 OR52N2Q8NGI0 321 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 MOAP1Q96BY2 351 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 SGCZQ96LD1 299 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 GNRHR2Q96P88 292 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 KLHDC3Q9BQ90 382 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 CCDC106Q9BWC9 280 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 TTTY12Q9BZ98 90 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 PIGUQ9H490 435 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.88□□□□□ -0.67
APTX-227ENST00000485479 MKLN1Q9UL63 735 aa10.88□□□□□ -0.67
APTX-227ENST00000485479 KLF13Q9Y2Y9 288 aaPredicted RBP10.88□□□□□ -0.67
APTX-227ENST00000485479 ZNF407Q9C0G0 2248 aa10.87□□□□□ -0.67
APTX-227ENST00000485479 PRAMEF25A6NGN4 478 aa10.87□□□□□ -0.67
APTX-227ENST00000485479 OR6C70A6NIJ9 312 aa10.87□□□□□ -0.67
APTX-227ENST00000485479 LRRC3CA6NJW4 275 aa10.87□□□□□ -0.67
APTX-227ENST00000485479 NPIPA5E9PKD4 350 aa10.87□□□□□ -0.67
APTX-227ENST00000485479 TP53I11O14683 189 aa10.87□□□□□ -0.67
APTX-227ENST00000485479 UTS2O95399 124 aa10.87□□□□□ -0.67
APTX-227ENST00000485479 IL33O95760 270 aa10.87□□□□□ -0.67
APTX-227ENST00000485479 ZNF24P17028 368 aa10.87□□□□□ -0.67
APTX-227ENST00000485479 EVI2BP34910 448 aa10.87□□□□□ -0.67
APTX-227ENST00000485479 MAGEA5P43359 124 aa10.87□□□□□ -0.67
APTX-227ENST00000485479 UQCRFS1P47985 274 aa10.87□□□□□ -0.67
APTX-227ENST00000485479 PLGLB1Q02325 96 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms