RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 OPN5Q6U736 354 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 MICU2Q8IYU8 434 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 BEST3Q8N1M1 668 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 FDCSPQ8NFU4 85 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 NFKBIDQ8NI38 313 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 DIO2Q92813 273 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 TMEM19Q96HH6 336 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 KCTD14Q9BQ13 255 aaPredicted RBP16.2■□□□□ 0.18
CHMP3-207ENST00000485465 G6PC3Q9BUM1 346 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 ZNF552Q9H707 407 aaPredicted RBP16.2■□□□□ 0.18
CHMP3-207ENST00000485465 FBXO34Q9NWN3 711 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 DMXL2Q8TDJ6 3036 aa16.2■□□□□ 0.18
CHMP3-207ENST00000485465 ACACAQ13085 2346 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 C5orf58C9J3I9 102 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 STX11O75558 287 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 PPM1BO75688 479 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 OR6B1O95007 311 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 H6PDO95479 791 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 CHRM4P08173 479 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 GUSBP08236 651 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 IL12BP29460 328 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 PCGF2P35227 344 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 SOX3P41225 446 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 RFX3P48380 749 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 PNLIPRP2P54317 469 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 PSMD4P55036 377 aaKnown RBP16.19■□□□□ 0.18
CHMP3-207ENST00000485465 TBR1Q16650 682 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 ZNF791Q3KP31 576 aaPredicted RBP16.19■□□□□ 0.18
CHMP3-207ENST00000485465 REEP3Q6NUK4 255 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 ISLR2Q6UXK2 745 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 LRRC74BQ6ZQY2 392 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 OLIG3Q7RTU3 272 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 ZAR1Q86SH2 424 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 GALNT10Q86SR1 603 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 SLC30A8Q8IWU4 369 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 TMEM156Q8N614 296 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 HIPK4Q8NE63 616 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 ASB15Q8WXK1 588 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 MCUR1Q96AQ8 359 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 EFHD2Q96C19 240 aaPredicted RBP16.19■□□□□ 0.18
CHMP3-207ENST00000485465 CLPTM1LQ96KA5 538 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 COL21A1Q96P44 957 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 ADOQ96SZ5 270 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 ZNF350Q9GZX5 532 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 POLE3Q9NRF9 147 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 CALML5Q9NZT1 146 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 ABI3Q9P2A4 366 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 ZMIZ1Q9ULJ6 1067 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 CELSR3Q9NYQ7 3312 aa16.19■□□□□ 0.18
CHMP3-207ENST00000485465 IGF2RP11717 2491 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 ERICH4A6NGS2 130 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 OR6C70A6NIJ9 312 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 FCMRO60667 390 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 PDE5AO76074 875 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 ZIC2O95409 532 aaPredicted RBP16.18■□□□□ 0.18
CHMP3-207ENST00000485465 ALPPP05187 535 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 TCN1P20061 433 aaPredicted RBP16.18■□□□□ 0.18
CHMP3-207ENST00000485465 ATP6V1C1P21283 382 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 HTR1EP28566 365 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 LCN1P31025 176 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 TMED10P49755 219 aaKnown RBP16.18■□□□□ 0.18
CHMP3-207ENST00000485465 ST13P50502 369 aaKnown RBP16.18■□□□□ 0.18
CHMP3-207ENST00000485465 CRISP3P54108 245 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 HPCAP84074 193 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 CHRNEQ04844 493 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 MFAP5Q13361 173 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 VEZF1Q14119 521 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 PRAMEF8Q5VWM4 474 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 PRAMEF7Q5VXH5 474 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 AP1ARQ63HQ0 302 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 PGM2L1Q6PCE3 622 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 FRRS1Q6ZNA5 592 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 LINC00696Q6ZRV3 163 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 DND1Q8IYX4 353 aaKnown RBP16.18■□□□□ 0.18
CHMP3-207ENST00000485465 FBXW8Q8N3Y1 598 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 FAM156AQ8NDB6 213 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 TNIP2Q8NFZ5 429 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 SPACA9Q96E40 222 aaPredicted RBP16.18■□□□□ 0.18
CHMP3-207ENST00000485465 TREX2Q9BQ50 279 aaPredicted RBP16.18■□□□□ 0.18
CHMP3-207ENST00000485465 SAP130Q9H0E3 1048 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 SLC38A1Q9H2H9 487 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 RUBCNLQ9H714 662 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 ZBTB20Q9HC78 741 aaPredicted RBP16.18■□□□□ 0.18
CHMP3-207ENST00000485465 BCL2L10Q9HD36 194 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 ANGPT4Q9Y264 503 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 WDR45Q9Y484 360 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 ZNF451Q9Y4E5 1061 aa16.18■□□□□ 0.18
CHMP3-207ENST00000485465 A0A0G2JPF8 293 aa16.17■□□□□ 0.18
CHMP3-207ENST00000485465 HNRNPCL2B2RXH8 293 aa16.17■□□□□ 0.18
CHMP3-207ENST00000485465 HNRNPCL3B7ZW38 293 aa16.17■□□□□ 0.18
CHMP3-207ENST00000485465 CDK2AP1O14519 115 aa16.17■□□□□ 0.18
CHMP3-207ENST00000485465 ABCB7O75027 752 aa16.17■□□□□ 0.18
CHMP3-207ENST00000485465 UGT2B11O75310 529 aa16.17■□□□□ 0.18
CHMP3-207ENST00000485465 SORBS2O94875 1100 aaKnown RBP16.17■□□□□ 0.18
CHMP3-207ENST00000485465 PGM3O95394 542 aa16.17■□□□□ 0.18
CHMP3-207ENST00000485465 HNRNPCL4P0DMR1 293 aa16.17■□□□□ 0.18
CHMP3-207ENST00000485465 CYP4B1P13584 511 aa16.17■□□□□ 0.18
CHMP3-207ENST00000485465 ME2P23368 584 aa16.17■□□□□ 0.18
CHMP3-207ENST00000485465 MSX2P35548 267 aaPredicted RBP16.17■□□□□ 0.18
CHMP3-207ENST00000485465 HLCSP50747 726 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms