RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 H0YAE9 185 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 ADAMDEC1O15204 470 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 ACOX3O15254 700 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 EMC8O43402 210 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 FOXS1O43638 330 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 HS6ST1O60243 411 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 SRPX2O60687 465 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-216ENST00000484087 SERPINB7O75635 380 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 FHP07954 510 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 THRBP10828 461 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 AGXTP21549 392 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 MATN1P21941 496 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 AQP1P29972 269 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 DNAJA1P31689 397 aaKnown RBP6.46□□□□□ -1.38
BRCA1-216ENST00000484087 CAPGP40121 348 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 CD97P48960 835 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 CDK9P50750 372 aaKnown RBP6.46□□□□□ -1.38
BRCA1-216ENST00000484087 MVDP53602 400 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 CASP9P55211 416 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 TPD52P55327 224 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-216ENST00000484087 TNFRSF17Q02223 184 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 EEF1A2Q05639 463 aaKnown RBP6.46□□□□□ -1.38
BRCA1-216ENST00000484087 C19orf57Q0VDD7 668 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 GRM7Q14831 915 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 NKG7Q16617 165 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 NDUFA9Q16795 377 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 PRSS53Q2L4Q9 553 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 PRTGQ2VWP7 1150 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 IFI44LQ53G44 452 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 PRR30Q53SZ7 412 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-216ENST00000484087 CRB2Q5IJ48 1285 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 COX20Q5RI15 118 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 TTC23Q5W5X9 447 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 FAM180BQ6P0A1 224 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 UGT2A3Q6UWM9 527 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 PIWIL3Q7Z3Z3 882 aaKnown RBP6.46□□□□□ -1.38
BRCA1-216ENST00000484087 KRT73Q86Y46 540 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 ARMC8Q8IUR7 673 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 CHERPQ8IWX8 916 aaKnown RBP6.46□□□□□ -1.38
BRCA1-216ENST00000484087 ARHGEF39Q8N4T4 335 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 AMER3Q8N944 861 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 FDCSPQ8NFU4 85 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 OR4K14Q8NGD5 310 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 OR5T3Q8NGG3 340 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 OR9A4Q8NGU2 314 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 GEMIN6Q8WXD5 167 aaKnown RBP6.46□□□□□ -1.38
BRCA1-216ENST00000484087 TFAP2CQ92754 450 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 MAL2Q969L2 176 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 MMABQ96EY8 250 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-216ENST00000484087 NRBF2Q96F24 287 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 NPLQ9BXD5 320 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-216ENST00000484087 GPR87Q9BY21 358 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 AICDAQ9GZX7 198 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 CHRNA10Q9GZZ6 450 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 ING2Q9H160 280 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 SLC25A18Q9H1K4 315 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 EPS8L2Q9H6S3 715 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 TRIM45Q9H8W5 580 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-216ENST00000484087 NTN4Q9HB63 628 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 CACYBPQ9HB71 228 aaKnown RBP6.46□□□□□ -1.38
BRCA1-216ENST00000484087 ZBTB20Q9HC78 741 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-216ENST00000484087 LYRM4Q9HD34 91 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 A4GALTQ9NPC4 353 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 SLAMF7Q9NQ25 335 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 GPATCH2Q9NW75 528 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 USE1Q9NZ43 259 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 C5AR2Q9P296 337 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 KIF17Q9P2E2 1029 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 TRPC4Q9UBN4 977 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 DAPP1Q9UN19 280 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 SRPK3Q9UPE1 567 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 MYRFQ9Y2G1 1151 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 PADI2Q9Y2J8 665 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 FAM32AQ9Y421 112 aaKnown RBP6.46□□□□□ -1.38
BRCA1-216ENST00000484087 CSAG2Q9Y5P2 127 aa6.46□□□□□ -1.38
BRCA1-216ENST00000484087 IGHV3-20A0A0C4DH32 117 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 FITM1A5D6W6 292 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 GLOD5A6NK44 160 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 DUXAA6NLW8 204 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 B8ZZF3 427 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 hCG_2039718K7EN88 272 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 SGK494L7N484 410 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 M0QX08 132 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 SOCS6O14544 535 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 PGRMC2O15173 223 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 DPM1O60762 260 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 RDH16O75452 317 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 CDC123O75794 336 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-216ENST00000484087 SLITRK5O94991 958 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 AGR2O95994 175 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 BCHEP06276 602 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 HBQ1P09105 142 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 RAB40ALP0C0E4 278 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 SMIM10L1P0DMW3 83 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 NR2F1P10589 423 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 FPR1P21462 350 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 FBLP22087 321 aaKnown RBP6.45□□□□□ -1.38
BRCA1-216ENST00000484087 MYF6P23409 242 aa6.45□□□□□ -1.38
BRCA1-216ENST00000484087 FEN1P39748 380 aaKnown RBP6.45□□□□□ -1.38
BRCA1-216ENST00000484087 DCTP40126 519 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms