RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 RAB39AQ14964 217 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 PTGES3Q15185 160 aaKnown RBP8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 GPR68Q15743 365 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 ARHGAP11BQ3KRB8 267 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 PLK5Q496M5 336 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 ATAD3BQ5T9A4 648 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 PRAMEF8Q5VWM4 474 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 PRAMEF7Q5VXH5 474 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 PODNL1Q6PEZ8 512 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 BORAQ6PGQ7 559 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 FIGNL1Q6PIW4 674 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 OR4N2Q8NGD1 307 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 OR52P1PQ8NH57 321 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 AHCYL2Q96HN2 611 aaKnown RBP8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 PSD2Q9BQI7 771 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 PINK1Q9BXM7 581 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 NAA50Q9GZZ1 169 aaKnown RBP8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 PIGUQ9H490 435 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 ERVMER34-1Q9H9K5 563 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 AMBNQ9NP70 447 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 DHCR7Q9UBM7 475 aaKnown RBP8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 REV1Q9UBZ9 1251 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 PILRBQ9UKJ0 227 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 RNF6Q9Y252 685 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 POFUT2Q9Y2G5 429 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 WDR45Q9Y484 360 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 CELSR3Q9NYQ7 3312 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 OTOGLQ3ZCN5 2332 aa8.23□□□□□ -1.09
CDC42SE1-204ENST00000483763 A0A1W2PRQ8 180 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 SH3PXD2BA1X283 911 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 FITM1A5D6W6 292 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 PRKNO60260 465 aaPredicted RBP8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 OR10H3O60404 316 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 SOX14O95416 240 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 ALPPP05187 535 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 RNH1P13489 461 aaKnown RBP8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 GABRA3P34903 492 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 KRT20P35900 424 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 RANBP1P43487 201 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 IDH2P48735 452 aaKnown RBP8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 EMDP50402 254 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 EFNA3P52797 238 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 EPHA4P54764 986 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 SLC35A2P78381 396 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 PSG6Q00889 435 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 DGCR6Q14129 220 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 DCST1Q5T197 706 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 PGBD2Q6P3X8 592 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 TTLL10Q6ZVT0 673 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 KANSL1Q7Z3B3 1105 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZER1Q7Z7L7 766 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 VWA5B2Q8N398 1253 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 AMER2Q8N7J2 671 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 MORN4Q8NDC4 146 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 OR2I1PQ8NGU4 316 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 OR51Q1Q8NH59 317 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZNF675Q8TD23 568 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 FAM122AQ96E09 287 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 UCN2Q96RP3 112 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 APOL4Q9BPW4 351 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 SPATA5L1Q9BVQ7 753 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 ALOXE3Q9BYJ1 711 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZNF350Q9GZX5 532 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 FANCEQ9HB96 536 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 NDUFA13Q9P0J0 144 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 ERVK-18Q9QC07 812 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 SLC9A8Q9Y2E8 581 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 ASCC3Q8N3C0 2202 aaKnown RBP8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 CEP250Q9BV73 2442 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 LY6G6EA0A0G2JKS1 128 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 AGAP5A6NIR3 686 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 TMEM150CB9EJG8 249 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 TMX2-CTNND1H3BSU7 103 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 OR10H2O60403 315 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 CTNSO60931 367 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 UGT2B17O75795 530 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 OR2B3O76000 313 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 CPNE6O95741 557 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 CCDC159P0C7I6 412 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 GABRB1P18505 474 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 ALAS2P22557 587 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 GGT2P36268 569 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 HSD11B2P80365 405 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 MVKQ03426 396 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 MAP4K2Q12851 820 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 PROX2Q3B8N5 592 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 INAVAQ3KP66 663 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZBED5Q49AG3 693 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 DCST2Q5T1A1 773 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 GTF2IRD2BQ6EKJ0 949 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZNF574Q6ZN55 896 aaPredicted RBP8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 GTF2IRD2Q86UP8 949 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 TMEM151BQ8IW70 566 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 PARP8Q8N3A8 854 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 CDRT4Q8N9R6 151 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 SETD9Q8NE22 299 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 OR1L3Q8NH93 324 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 GPR151Q8TDV0 419 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 RIT1Q92963 219 aa8.22□□□□□ -1.09
CDC42SE1-204ENST00000483763 ZNF566Q969W8 418 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms