RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 ZNF672Q499Z4 452 aaPredicted RBP11.96□□□□□ -0.49
NDC1-202ENST00000480952 CT45A2Q5DJT8 189 aa11.96□□□□□ -0.49
NDC1-202ENST00000480952 NCMAPQ5T1S8 102 aa11.96□□□□□ -0.49
NDC1-202ENST00000480952 FAM180BQ6P0A1 224 aa11.96□□□□□ -0.49
NDC1-202ENST00000480952 TBC1D1Q86TI0 1168 aaPredicted RBP11.96□□□□□ -0.49
NDC1-202ENST00000480952 ZBED8Q8IZ13 594 aa11.96□□□□□ -0.49
NDC1-202ENST00000480952 L3MBTL4Q8NA19 623 aa11.96□□□□□ -0.49
NDC1-202ENST00000480952 STEAP2Q8NFT2 490 aa11.96□□□□□ -0.49
NDC1-202ENST00000480952 TRPC4APQ8TEL6 797 aa11.96□□□□□ -0.49
NDC1-202ENST00000480952 RNF138Q8WVD3 245 aa11.96□□□□□ -0.49
NDC1-202ENST00000480952 S100PBPQ96BU1 408 aa11.96□□□□□ -0.49
NDC1-202ENST00000480952 EFHD2Q96C19 240 aaPredicted RBP11.96□□□□□ -0.49
NDC1-202ENST00000480952 TNFRSF13CQ96RJ3 184 aa11.96□□□□□ -0.49
NDC1-202ENST00000480952 RBBP8Q99708 897 aa11.96□□□□□ -0.49
NDC1-202ENST00000480952 MRPL1Q9BYD6 325 aaKnown RBP11.96□□□□□ -0.49
NDC1-202ENST00000480952 TMEM160Q9NX00 188 aa11.96□□□□□ -0.49
NDC1-202ENST00000480952 STOML1Q9UBI4 398 aa11.96□□□□□ -0.49
NDC1-202ENST00000480952 SNX8Q9Y5X2 465 aa11.96□□□□□ -0.49
NDC1-202ENST00000480952 CR1P17927 2039 aa11.96□□□□□ -0.5
NDC1-202ENST00000480952 EIF1AYO14602 144 aaKnown RBP11.95□□□□□ -0.5
NDC1-202ENST00000480952 WIPF1O43516 503 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 DLX3O60479 287 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 SS18L1O75177 396 aaPredicted RBP11.95□□□□□ -0.5
NDC1-202ENST00000480952 NME6O75414 186 aaPredicted RBP11.95□□□□□ -0.5
NDC1-202ENST00000480952 CLDN9O95484 217 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 THBS1P07996 1170 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 LTA4HP09960 611 aaKnown RBP11.95□□□□□ -0.5
NDC1-202ENST00000480952 MTHFD2P13995 350 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 GP5P40197 560 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 ALDH9A1P49189 494 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 CASP9P55211 416 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 SRSF2Q01130 221 aaKnown RBP11.95□□□□□ -0.5
NDC1-202ENST00000480952 DUSP2Q05923 314 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 RUNX1T1Q06455 604 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 ZNF844Q08AG5 666 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 GTF2H2Q13888 395 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 PGGHGQ32M88 737 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 TTC19Q6DKK2 380 aaPredicted RBP11.95□□□□□ -0.5
NDC1-202ENST00000480952 GTF2H2CQ6P1K8 395 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 GOLGA7Q7Z5G4 137 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 SLC44A2Q8IWA5 706 aaPredicted RBP11.95□□□□□ -0.5
NDC1-202ENST00000480952 OR52B6Q8NGF0 335 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 UHMK1Q8TAS1 419 aaKnown RBP11.95□□□□□ -0.5
NDC1-202ENST00000480952 ATP6V1E2Q96A05 226 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 C11orf24Q96F05 449 aaPredicted RBP11.95□□□□□ -0.5
NDC1-202ENST00000480952 CDK15Q96Q40 435 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 OSBPL9Q96SU4 736 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 HDHD5Q9BXW7 423 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 ANKRA2Q9H9E1 313 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 PFDN4Q9NQP4 134 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 GLRX2Q9NS18 164 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 MCTS1Q9ULC4 181 aaKnown RBP11.95□□□□□ -0.5
NDC1-202ENST00000480952 ACOT9Q9Y305 439 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 OR10H1Q9Y4A9 318 aa11.95□□□□□ -0.5
NDC1-202ENST00000480952 SSTR1P30872 391 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 SPRP35270 261 aaPredicted RBP11.94□□□□□ -0.5
NDC1-202ENST00000480952 NUDT6P53370 316 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 ALDH18A1P54886 795 aaKnown RBP11.94□□□□□ -0.5
NDC1-202ENST00000480952 NRF1Q16656 503 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.94□□□□□ -0.5
NDC1-202ENST00000480952 ERCC6LQ2NKX8 1250 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 GLYR1Q49A26 553 aaPredicted RBP11.94□□□□□ -0.5
NDC1-202ENST00000480952 SGO1Q5FBB7 561 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 LGSNQ5TDP6 509 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 FRG2Q64ET8 278 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 CYB5R2Q6BCY4 276 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 NPSR1Q6W5P4 371 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 DNAJC14Q6Y2X3 702 aaPredicted RBP11.94□□□□□ -0.5
NDC1-202ENST00000480952 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.94□□□□□ -0.5
NDC1-202ENST00000480952 CMC1Q7Z7K0 106 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 CCDC116Q8IYX3 515 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 METTL4Q8N3J2 472 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 OR4N2Q8NGD1 307 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 DUSP19Q8WTR2 217 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 PYROXD1Q8WU10 500 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 HSD17B8Q92506 261 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 TM4SF18Q96CE8 201 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 NXNL1Q96CM4 212 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 C1GALT1C1Q96EU7 318 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 CNRIP1Q96F85 164 aaPredicted RBP11.94□□□□□ -0.5
NDC1-202ENST00000480952 ZNF681Q96N22 645 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 FRG2BQ96QU4 278 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 TRAF4Q9BUZ4 470 aaPredicted RBP11.94□□□□□ -0.5
NDC1-202ENST00000480952 FAIM2Q9BWQ8 316 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 C12orf49Q9H741 205 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 NOL11Q9H8H0 719 aaKnown RBP11.94□□□□□ -0.5
NDC1-202ENST00000480952 ZBTB26Q9HCK0 441 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 SAYSD1Q9NPB0 183 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 FAIMQ9NVQ4 179 aa11.94□□□□□ -0.5
NDC1-202ENST00000480952 E7ESA3 106 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 UBFD1O14562 309 aaKnown RBP11.93□□□□□ -0.5
NDC1-202ENST00000480952 SEC31AO94979 1220 aaKnown RBP11.93□□□□□ -0.5
NDC1-202ENST00000480952 SYNGR4O95473 234 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 CD8AP01732 235 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 PYGBP11216 843 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 SRD5A1P18405 259 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 IL32P24001 234 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 ADH6P28332 368 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 CRABP2P29373 138 aa11.93□□□□□ -0.5
NDC1-202ENST00000480952 CLK3P49761 638 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms