RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 FNDC11Q9BVV2 318 aa10.24□□□□□ -0.77
VTI1A-204ENST00000480057 GTPBP2Q9BX10 602 aaKnown RBP10.24□□□□□ -0.77
VTI1A-204ENST00000480057 DGCR6LQ9BY27 220 aa10.24□□□□□ -0.77
VTI1A-204ENST00000480057 ING2Q9H160 280 aa10.24□□□□□ -0.77
VTI1A-204ENST00000480057 Q9N2J8 555 aa10.24□□□□□ -0.77
VTI1A-204ENST00000480057 DHCR7Q9UBM7 475 aaKnown RBP10.24□□□□□ -0.77
VTI1A-204ENST00000480057 BLOC1S6Q9UL45 172 aa10.24□□□□□ -0.77
VTI1A-204ENST00000480057 NDRG4Q9ULP0 352 aaKnown RBP10.24□□□□□ -0.77
VTI1A-204ENST00000480057 PCDHGA10Q9Y5H3 936 aa10.24□□□□□ -0.77
VTI1A-204ENST00000480057 MAU2Q9Y6X3 613 aa10.24□□□□□ -0.77
VTI1A-204ENST00000480057 ADAMTS9Q9P2N4 1935 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 DPPA5A6NC42 116 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 C17orf105B2RV13 164 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 D6RAR5 112 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 M0R3H8 397 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 AP3D1O14617 1153 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 PCDH17O14917 1159 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 HYAL3O43820 417 aaPredicted RBP10.23□□□□□ -0.77
VTI1A-204ENST00000480057 MITFO75030 526 aaPredicted RBP10.23□□□□□ -0.77
VTI1A-204ENST00000480057 SEMA7AO75326 666 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 CDC123O75794 336 aaPredicted RBP10.23□□□□□ -0.77
VTI1A-204ENST00000480057 KCNK2O95069 426 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 OR5F1O95221 314 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 IFNA16P05015 189 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 FGF5P12034 268 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 IL7RP16871 459 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 TNNI3P19429 210 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 IFNGR2P38484 337 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 RPL5P46777 297 aaKnown RBP10.23□□□□□ -0.77
VTI1A-204ENST00000480057 NR1H2P55055 460 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 RGS8P57771 180 aaPredicted RBP10.23□□□□□ -0.77
VTI1A-204ENST00000480057 GABARAPL2P60520 117 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 CXCR4P61073 352 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 ISL1P61371 349 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 DCAF7P61962 342 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 ESRRGP62508 458 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 CSNK2BP67870 215 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 TEKQ02763 1124 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 ST3GAL3Q11203 375 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 COX10Q12887 443 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 ZNF267Q14586 743 aaPredicted RBP10.23□□□□□ -0.77
VTI1A-204ENST00000480057 GANABQ14697 944 aaKnown RBP10.23□□□□□ -0.77
VTI1A-204ENST00000480057 LAPTM4AQ15012 233 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 NPTX1Q15818 432 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.23□□□□□ -0.77
VTI1A-204ENST00000480057 ANKRD34AQ69YU3 496 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 ZC3H14Q6PJT7 736 aaKnown RBP10.23□□□□□ -0.77
VTI1A-204ENST00000480057 CD300LDQ6UXZ3 194 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 ZNF836Q6ZNA1 936 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 WDR53Q7Z5U6 358 aaPredicted RBP10.23□□□□□ -0.77
VTI1A-204ENST00000480057 COMTD1Q86VU5 262 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 VRK2Q86Y07 508 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 GRAMD2AQ8IUY3 354 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 LACC1Q8IV20 430 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 CMIPQ8IY22 773 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 OR14A16Q8NHC5 309 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 ADAMTS16Q8TE57 1224 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 PTPMT1Q8WUK0 201 aaPredicted RBP10.23□□□□□ -0.77
VTI1A-204ENST00000480057 DAZLQ92904 295 aaKnown RBP10.23□□□□□ -0.77
VTI1A-204ENST00000480057 ZNF566Q969W8 418 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 HRASLS5Q96KN8 279 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 OR6C1Q96RD1 312 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 YIPF2Q9BWQ6 316 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 SLC7A5P2Q9GIP4 190 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 OR10A5Q9H207 317 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 RIBC2Q9H4K1 309 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 SOX17Q9H6I2 414 aaPredicted RBP10.23□□□□□ -0.77
VTI1A-204ENST00000480057 MKLN1Q9UL63 735 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 ERVK-19Q9WJR5 959 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 CHST2Q9Y4C5 530 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 GMPPBQ9Y5P6 360 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 KMT2EQ8IZD2 1858 aa10.23□□□□□ -0.77
VTI1A-204ENST00000480057 TRBV4-1A0A0J9YWV2 114 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 MYOCOSA0A1B0GUC4 107 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 SMIM31A0A1B0GVY4 71 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 SH3PXD2BA1X283 911 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 CDHR4A6H8M9 788 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 OR6C76A6NM76 312 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 EIF4E1BA6NMX2 242 aaKnown RBP10.22□□□□□ -0.77
VTI1A-204ENST00000480057 MRPS14O60783 128 aaKnown RBP10.22□□□□□ -0.77
VTI1A-204ENST00000480057 SCRG1O75711 98 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 LDOC1O95751 146 aaPredicted RBP10.22□□□□□ -0.77
VTI1A-204ENST00000480057 CLIC3O95833 236 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 CLPSP04118 112 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 IGKV3-11P04433 115 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 CCDC159P0C7I6 412 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 CCNYL3P0C7X3 344 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 DRD5P21918 477 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 SSTR4P31391 388 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 PPICP45877 212 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 CLK3P49761 638 aaKnown RBP10.22□□□□□ -0.77
VTI1A-204ENST00000480057 HLCSP50747 726 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 UGT2B15P54855 530 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 ALDH6A1Q02252 535 aaKnown RBP10.22□□□□□ -0.77
VTI1A-204ENST00000480057 ZFP36L1Q07352 338 aaKnown RBP10.22□□□□□ -0.77
VTI1A-204ENST00000480057 TRAM2Q15035 370 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 GPR68Q15743 365 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 ZNF141Q15928 474 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 FGD3Q5JSP0 725 aa10.22□□□□□ -0.77
VTI1A-204ENST00000480057 LAIR1Q6GTX8 287 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms