RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 KLRC3Q07444 240 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 CHIT1Q13231 466 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 EXT1Q16394 746 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 UGCGQ16739 394 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 GPR65Q8IYL9 337 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 PARP16Q8N5Y8 322 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 TSEN2Q8NCE0 465 aaKnown RBP5.18□□□□□ -1.58
USF3-202ENST00000478658 PLPP5Q8NEB5 264 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 OR52J3Q8NH60 311 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 THEM6Q8WUY1 208 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 RTN4IP1Q8WWV3 396 aaPredicted RBP5.18□□□□□ -1.58
USF3-202ENST00000478658 TMEM18Q96B42 140 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 MAP3K3Q99759 626 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 RTFDC1Q9BY42 306 aaPredicted RBP5.18□□□□□ -1.58
USF3-202ENST00000478658 SMDT1Q9H4I9 107 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 GPN2Q9H9Y4 310 aaPredicted RBP5.18□□□□□ -1.58
USF3-202ENST00000478658 C12orf10Q9HB07 376 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 RCC2Q9P258 522 aaKnown RBP5.18□□□□□ -1.58
USF3-202ENST00000478658 PRSS50Q9UI38 385 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 EIF3FO00303 357 aaPredicted RBP5.18□□□□□ -1.58
USF3-202ENST00000478658 SOCS7O14512 581 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 ENPP3O14638 875 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 ZIC2O95409 532 aaPredicted RBP5.18□□□□□ -1.58
USF3-202ENST00000478658 RECKO95980 971 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 H1F0P07305 194 aaKnown RBP5.18□□□□□ -1.58
USF3-202ENST00000478658 SOX11P35716 441 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 CLDN8P56748 225 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 ZNF776Q68DI1 518 aaPredicted RBP5.18□□□□□ -1.58
USF3-202ENST00000478658 FOXRED2Q8IWF2 684 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 ZNF383Q8NA42 475 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 XAGE5Q8WWM1 108 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 MUL1Q969V5 352 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 FAAP24Q9BTP7 215 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 MRPL13Q9BYD1 178 aaKnown RBP5.18□□□□□ -1.58
USF3-202ENST00000478658 PRDM12Q9H4Q4 367 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 SPANXA1Q9NS26 97 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 PKIGQ9Y2B9 76 aa5.18□□□□□ -1.58
USF3-202ENST00000478658 TMEM184BQ9Y519 407 aaPredicted RBP5.18□□□□□ -1.58
USF3-202ENST00000478658 ANKRD26Q9UPS8 1709 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 SPINT2O43291 252 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 SGCEO43556 437 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 CNIH1O95406 144 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 PPP1R17O96001 155 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ZDHHC11BP0C7U3 371 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 KLRK1P26718 216 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 SHMT2P34897 504 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ACVRL1P37023 503 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 OR10A3P58181 314 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 LAPTM4AQ15012 233 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 UBE2SQ16763 222 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 METTL7BQ6UX53 244 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 CLNKQ7Z7G1 428 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 WDR5BQ86VZ2 330 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 SLC35F3Q8IY50 421 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 SLC5A8Q8N695 610 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 SLAIN1Q8ND83 568 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 CPNE4Q96A23 557 aaPredicted RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 LURAP1Q96LR2 239 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 CHIAQ9BZP6 476 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 SMPD4Q9NXE4 827 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 RALYQ9UKM9 306 aaKnown RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 STXBP5LQ9Y2K9 1186 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 FER1L6Q2WGJ9 1857 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 UNC13BO14795 1591 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 CEBPZOSA8MTT3 80 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ANKRD66B4E2M5 251 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 MAP2K7O14733 419 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 SEPT4O43236 478 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 MT-ND4LP03901 98 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 GALTP07902 379 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 GSTP1P09211 210 aaKnown RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 MMP7P09237 267 aaPredicted RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 OR10J4P0C629 311 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 DNASE1P24855 282 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 TACR1P25103 407 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ACSM1Q08AH1 577 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 NOGQ13253 232 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 CIRBPQ14011 172 aaKnown RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 RBM12BQ8IXT5 1001 aaKnown RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 ZBTB10Q96DT7 871 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 TMEM80Q96HE8 168 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 GPR78Q96P69 363 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 HINT2Q9BX68 163 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ARV1Q9H2C2 271 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ZDHHC11Q9H8X9 412 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 CHST11Q9NPF2 352 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 C1orf123Q9NWV4 160 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 UNC13AQ9UPW8 1703 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 CHRM4P08173 479 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 MYCLP1P12525 358 aaPredicted RBP5.17□□□□□ -1.58
USF3-202ENST00000478658 PRKACBP22694 351 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 GABREP78334 506 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 AKR1C1Q04828 323 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 LIPIQ6XZB0 460 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 DOLPP1Q86YN1 238 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 SLC37A3Q8NCC5 494 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 HLA-CQ95604 372 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 RAB37Q96AX2 223 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 TAMM41Q96BW9 452 aa5.17□□□□□ -1.58
USF3-202ENST00000478658 ZNF486Q96H40 463 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms