RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 BHLHE41Q9C0J9 482 aaPredicted RBP13.33□□□□□ -0.28
USP11-207ENST00000478596 ADAP2Q9NPF8 381 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 SAR1AQ9NR31 198 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 Q9UFV3 132 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 CLCA3PQ9Y6N3 262 aa13.33□□□□□ -0.28
USP11-207ENST00000478596 SONP18583 2426 aaKnown RBP13.32□□□□□ -0.28
USP11-207ENST00000478596 IGHV3-20A0A0C4DH32 117 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 A0A1W2PRB8 838 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 TCRBV16S1A1N1A0A5B0 115 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 WASHC1A8K0Z3 465 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 C17orf105B2RV13 164 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 GOSR1O95249 250 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 ANP32DO95626 131 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 CPSF4O95639 269 aaKnown RBP13.32□□□□□ -0.28
USP11-207ENST00000478596 PGRP06401 933 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 STT3AP46977 705 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 C21orf58P58505 322 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 KLF10Q13118 480 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 ELAVL1Q15717 326 aaKnown RBP13.32□□□□□ -0.28
USP11-207ENST00000478596 LTB4RQ15722 352 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 GXYLT1Q4G148 440 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 ZNF468Q5VIY5 522 aaPredicted RBP13.32□□□□□ -0.28
USP11-207ENST00000478596 FBXW10Q5XX13 1052 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 ZNF227Q86WZ6 799 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 SNX32Q86XE0 403 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 P3H2Q8IVL5 708 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 GALNT12Q8IXK2 581 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 CCDC116Q8IYX3 515 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 ST13P4Q8IZP2 240 aaPredicted RBP13.32□□□□□ -0.28
USP11-207ENST00000478596 NATD1Q8N6N6 113 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.32□□□□□ -0.28
USP11-207ENST00000478596 ANKRD9Q96BM1 317 aaPredicted RBP13.32□□□□□ -0.28
USP11-207ENST00000478596 SPDL1Q96EA4 605 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 CNRIP1Q96F85 164 aaPredicted RBP13.32□□□□□ -0.28
USP11-207ENST00000478596 ZNF764Q96H86 408 aaPredicted RBP13.32□□□□□ -0.28
USP11-207ENST00000478596 ART5Q96L15 291 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 TEX37Q96LM6 180 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 LPAR4Q99677 370 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 FAM120CQ9NX05 1096 aaKnown RBP13.32□□□□□ -0.28
USP11-207ENST00000478596 COPS7AQ9UBW8 275 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 SNX8Q9Y5X2 465 aa13.32□□□□□ -0.28
USP11-207ENST00000478596 PHF3Q92576 2039 aaKnown RBP13.31□□□□□ -0.28
USP11-207ENST00000478596 A0A1W2PS29 197 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 TGFBR3LH3BV60 316 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 ANKRD28O15084 1053 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 SLC22A2O15244 555 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 TBX19O60806 448 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 C6orf47O95873 294 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 IFNA2P01563 188 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 SLC35E2P0CK97 266 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 IL12AP29459 219 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 UQCRC1P31930 480 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 MRPL19P49406 292 aaKnown RBP13.31□□□□□ -0.28
USP11-207ENST00000478596 CYB561P49447 251 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 BIKQ13323 160 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 RCAN2Q14206 197 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 PAPD4Q6PIY7 484 aaKnown RBP13.31□□□□□ -0.28
USP11-207ENST00000478596 ANGPTL8Q6UXH0 198 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 B3GNT6Q6ZMB0 384 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 RIMKLAQ8IXN7 391 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 VWA5B2Q8N398 1253 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 PLPP5Q8NEB5 264 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 ADCY4Q8NFM4 1077 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 OR9A2Q8NGT5 310 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 OR14A16Q8NHC5 309 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 DAZLQ92904 295 aaKnown RBP13.31□□□□□ -0.28
USP11-207ENST00000478596 RIT1Q92963 219 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 VPS33AQ96AX1 596 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 PPWD1Q96BP3 646 aaKnown RBP13.31□□□□□ -0.28
USP11-207ENST00000478596 OR8D2Q9GZM6 311 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 ZNF385DQ9H6B1 395 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 DDX18Q9NVP1 670 aaKnown RBP13.31□□□□□ -0.28
USP11-207ENST00000478596 CES1P1Q9UKY3 287 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 EXO1Q9UQ84 846 aaKnown RBP13.31□□□□□ -0.28
USP11-207ENST00000478596 KLF13Q9Y2Y9 288 aaPredicted RBP13.31□□□□□ -0.28
USP11-207ENST00000478596 FAM215AQ9Y5M1 114 aa13.31□□□□□ -0.28
USP11-207ENST00000478596 IGKV3D-11A0A0A0MRZ8 115 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 SAGE2PA6NJ88 616 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 FIGNL2A6NMB9 653 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 KLRC4-KLRK1H3BQV0 150 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 BMP7P18075 431 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 ADH7P40394 386 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 MXRA7P84157 204 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 LRRC74AQ0VAA2 488 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 CYLC2Q14093 348 aaPredicted RBP13.3□□□□□ -0.28
USP11-207ENST00000478596 ZNF267Q14586 743 aaPredicted RBP13.3□□□□□ -0.28
USP11-207ENST00000478596 VPS26BQ4G0F5 336 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 TMEM107Q6UX40 140 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 ZNF551Q7Z340 670 aaPredicted RBP13.3□□□□□ -0.28
USP11-207ENST00000478596 WDR53Q7Z5U6 358 aaPredicted RBP13.3□□□□□ -0.28
USP11-207ENST00000478596 CLECL1Q8IZS7 167 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 TRIML2Q8N7C3 387 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 POU5F2Q8N7G0 328 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 ZFP62Q8NB50 900 aaPredicted RBP13.3□□□□□ -0.28
USP11-207ENST00000478596 OR8J2Q8NGG1 315 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 DOK4Q8TEW6 326 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 KAT2AQ92830 837 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 TMEM125Q96AQ2 219 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 ITCHQ96J02 903 aa13.3□□□□□ -0.28
USP11-207ENST00000478596 AMDHD1Q96NU7 426 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms