RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 IGKV1D-16P01601 117 aa26.72■■□□□ 1.87
VEGFA-211ENST00000476772 ZNF26P17031 533 aaPredicted RBP26.72■■□□□ 1.87
VEGFA-211ENST00000476772 CSRP1P21291 193 aaKnown RBP26.72■■□□□ 1.87
VEGFA-211ENST00000476772 KCNC4Q03721 635 aa26.72■■□□□ 1.87
VEGFA-211ENST00000476772 PPP1R8Q12972 351 aaKnown RBP26.72■■□□□ 1.87
VEGFA-211ENST00000476772 ZBTB49Q6ZSB9 765 aa26.72■■□□□ 1.87
VEGFA-211ENST00000476772 ZAR1Q86SH2 424 aa26.72■■□□□ 1.87
VEGFA-211ENST00000476772 C9orf40Q8IXQ3 194 aa26.72■■□□□ 1.87
VEGFA-211ENST00000476772 GALNT4Q8N4A0 578 aa26.72■■□□□ 1.87
VEGFA-211ENST00000476772 ZNF184Q99676 751 aaPredicted RBP26.72■■□□□ 1.87
VEGFA-211ENST00000476772 SPRY4Q9C004 299 aa26.72■■□□□ 1.87
VEGFA-211ENST00000476772 PTRH2Q9Y3E5 179 aaKnown RBP26.72■■□□□ 1.87
VEGFA-211ENST00000476772 OR10H1Q9Y4A9 318 aa26.72■■□□□ 1.87
VEGFA-211ENST00000476772 NPIPA5A0A0B4J1W7 369 aa26.71■■□□□ 1.87
VEGFA-211ENST00000476772 CENPVL1A0A0U1RR11 272 aa26.71■■□□□ 1.87
VEGFA-211ENST00000476772 NPIPA7E9PJI5 369 aa26.71■■□□□ 1.87
VEGFA-211ENST00000476772 SOCS2O14508 198 aa26.71■■□□□ 1.87
VEGFA-211ENST00000476772 KLF7O75840 302 aaPredicted RBP26.71■■□□□ 1.87
VEGFA-211ENST00000476772 NPIPA8P0DM63 369 aa26.71■■□□□ 1.87
VEGFA-211ENST00000476772 GPR143P51810 404 aa26.71■■□□□ 1.87
VEGFA-211ENST00000476772 TARDBPQ13148 414 aaKnown RBP eCLIP26.71■■□□□ 1.87
VEGFA-211ENST00000476772 CPEB2Q7Z5Q1 589 aaKnown RBP26.71■■□□□ 1.87
VEGFA-211ENST00000476772 CARM1Q86X55 608 aa26.71■■□□□ 1.87
VEGFA-211ENST00000476772 PEX5LQ8IYB4 626 aa26.71■■□□□ 1.87
VEGFA-211ENST00000476772 OR4D11Q8NGI4 311 aa26.71■■□□□ 1.87
VEGFA-211ENST00000476772 C8orf44Q96CB5 159 aa26.71■■□□□ 1.87
VEGFA-211ENST00000476772 ZNF300Q96RE9 604 aaPredicted RBP26.71■■□□□ 1.87
VEGFA-211ENST00000476772 WDR77Q9BQA1 342 aaPredicted RBP26.71■■□□□ 1.87
VEGFA-211ENST00000476772 WFDC6Q9BQY6 131 aa26.71■■□□□ 1.87
VEGFA-211ENST00000476772 C9orf16Q9BUW7 83 aa26.71■■□□□ 1.87
VEGFA-211ENST00000476772 POLE3Q9NRF9 147 aa26.71■■□□□ 1.87
VEGFA-211ENST00000476772 C19orf25Q9UFG5 118 aaPredicted RBP26.71■■□□□ 1.87
VEGFA-211ENST00000476772 PADI1Q9ULC6 663 aa26.71■■□□□ 1.87
VEGFA-211ENST00000476772 CBLCQ9ULV8 474 aa26.71■■□□□ 1.87
VEGFA-211ENST00000476772 IFNW1P05000 195 aa26.7■■□□□ 1.87
VEGFA-211ENST00000476772 PIGAP37287 484 aa26.7■■□□□ 1.87
VEGFA-211ENST00000476772 PPICP45877 212 aa26.7■■□□□ 1.87
VEGFA-211ENST00000476772 YAP1P46937 504 aaKnown RBP26.7■■□□□ 1.87
VEGFA-211ENST00000476772 EBPQ15125 230 aaKnown RBP26.7■■□□□ 1.87
VEGFA-211ENST00000476772 TMEM164Q5U3C3 297 aa26.7■■□□□ 1.87
VEGFA-211ENST00000476772 PAPD4Q6PIY7 484 aaKnown RBP26.7■■□□□ 1.87
VEGFA-211ENST00000476772 LACC1Q8IV20 430 aa26.7■■□□□ 1.87
VEGFA-211ENST00000476772 CBR4Q8N4T8 237 aa26.7■■□□□ 1.87
VEGFA-211ENST00000476772 NFAM1Q8NET5 270 aaPredicted RBP26.7■■□□□ 1.87
VEGFA-211ENST00000476772 VANGL1Q8TAA9 524 aaPredicted RBP26.7■■□□□ 1.87
VEGFA-211ENST00000476772 DNAJC9Q8WXX5 260 aa26.7■■□□□ 1.87
VEGFA-211ENST00000476772 ADIPOR1Q96A54 375 aa26.7■■□□□ 1.87
VEGFA-211ENST00000476772 GAL3ST4Q96RP7 486 aa26.7■■□□□ 1.87
VEGFA-211ENST00000476772 ZNF443Q9Y2A4 671 aaPredicted RBP26.7■■□□□ 1.87
VEGFA-211ENST00000476772 C15orf41Q9Y2V0 281 aa26.7■■□□□ 1.87
VEGFA-211ENST00000476772 U3KQV3 271 aa26.7■■□□□ 1.87
VEGFA-211ENST00000476772 AGAP5A6NIR3 686 aa26.7■■□□□ 1.86
VEGFA-211ENST00000476772 LGI1O95970 557 aa26.7■■□□□ 1.86
VEGFA-211ENST00000476772 UMODP07911 640 aa26.7■■□□□ 1.86
VEGFA-211ENST00000476772 CCNYL3P0C7X3 344 aa26.7■■□□□ 1.86
VEGFA-211ENST00000476772 NRF1Q16656 503 aa26.7■■□□□ 1.86
VEGFA-211ENST00000476772 TMEM179BQ7Z7N9 219 aa26.7■■□□□ 1.86
VEGFA-211ENST00000476772 NXF5Q9H1B4 397 aaKnown RBP26.7■■□□□ 1.86
VEGFA-211ENST00000476772 VCXQ9H320 206 aa26.7■■□□□ 1.86
VEGFA-211ENST00000476772 TRIM45Q9H8W5 580 aaPredicted RBP26.7■■□□□ 1.86
VEGFA-211ENST00000476772 CACYBPQ9HB71 228 aaKnown RBP26.7■■□□□ 1.86
VEGFA-211ENST00000476772 CNOT11Q9UKZ1 510 aaKnown RBP26.7■■□□□ 1.86
VEGFA-211ENST00000476772 IFT52Q9Y366 437 aa26.7■■□□□ 1.86
VEGFA-211ENST00000476772 CHST2Q9Y4C5 530 aa26.7■■□□□ 1.86
VEGFA-211ENST00000476772 ENPP4Q9Y6X5 453 aa26.7■■□□□ 1.86
VEGFA-211ENST00000476772 J3KTA2 159 aa26.69■■□□□ 1.86
VEGFA-211ENST00000476772 M0R3H8 397 aa26.69■■□□□ 1.86
VEGFA-211ENST00000476772 PEX12O00623 359 aa26.69■■□□□ 1.86
VEGFA-211ENST00000476772 ITGA2P17301 1181 aa26.69■■□□□ 1.86
VEGFA-211ENST00000476772 RPS4Y1P22090 263 aaKnown RBP26.69■■□□□ 1.86
VEGFA-211ENST00000476772 PRKAR1BP31321 381 aa26.69■■□□□ 1.86
VEGFA-211ENST00000476772 MAPK14Q16539 360 aa26.69■■□□□ 1.86
VEGFA-211ENST00000476772 DHRS4L2Q6PKH6 230 aa26.69■■□□□ 1.86
VEGFA-211ENST00000476772 RBM45Q8IUH3 476 aaKnown RBP26.69■■□□□ 1.86
VEGFA-211ENST00000476772 BCORP1Q8N888 145 aa26.69■■□□□ 1.86
VEGFA-211ENST00000476772 B3GNT7Q8NFL0 401 aa26.69■■□□□ 1.86
VEGFA-211ENST00000476772 KCNE5Q9UJ90 142 aa26.69■■□□□ 1.86
VEGFA-211ENST00000476772 MAGED1Q9Y5V3 778 aaPredicted RBP26.69■■□□□ 1.86
VEGFA-211ENST00000476772 C2orf92A0A1B0GVN3 265 aa26.68■■□□□ 1.86
VEGFA-211ENST00000476772 OR6C76A6NM76 312 aa26.68■■□□□ 1.86
VEGFA-211ENST00000476772 TM4SF5O14894 197 aa26.68■■□□□ 1.86
VEGFA-211ENST00000476772 E2F6O75461 281 aa26.68■■□□□ 1.86
VEGFA-211ENST00000476772 SEC24DO94855 1032 aaPredicted RBP26.68■■□□□ 1.86
VEGFA-211ENST00000476772 ATP6V1C1P21283 382 aa26.68■■□□□ 1.86
VEGFA-211ENST00000476772 FLYWCH1Q4VC44 716 aa26.68■■□□□ 1.86
VEGFA-211ENST00000476772 AP1ARQ63HQ0 302 aa26.68■■□□□ 1.86
VEGFA-211ENST00000476772 PPP4R4Q6NUP7 873 aa26.68■■□□□ 1.86
VEGFA-211ENST00000476772 TBPL2Q6SJ96 375 aa26.68■■□□□ 1.86
VEGFA-211ENST00000476772 SLC29A4Q7RTT9 530 aa26.68■■□□□ 1.86
VEGFA-211ENST00000476772 OR2Y1Q8NGV0 311 aa26.68■■□□□ 1.86
VEGFA-211ENST00000476772 LCORQ96JN0 433 aaPredicted RBP26.68■■□□□ 1.86
VEGFA-211ENST00000476772 LMF1Q96S06 567 aa26.68■■□□□ 1.86
VEGFA-211ENST00000476772 ZNF347Q96SE7 839 aa26.68■■□□□ 1.86
VEGFA-211ENST00000476772 LPAR4Q99677 370 aa26.68■■□□□ 1.86
VEGFA-211ENST00000476772 ZNF223Q9UK11 482 aaPredicted RBP26.68■■□□□ 1.86
VEGFA-211ENST00000476772 LRRC42Q9Y546 428 aa26.68■■□□□ 1.86
VEGFA-211ENST00000476772 NINQ8N4C6 2090 aa26.68■■□□□ 1.86
VEGFA-211ENST00000476772 SDK2Q58EX2 2172 aa26.67■■□□□ 1.86
VEGFA-211ENST00000476772 ZFHX2Q9C0A1 2572 aaPredicted RBP26.67■■□□□ 1.86
VEGFA-211ENST00000476772 FRG2CA6NGY1 282 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms