RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 ASB4Q9Y574 426 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 AUP1Q9Y679 476 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 NUP214P35658 2090 aaPredicted RBP6.44□□□□□ -1.38
UBR4-212ENST00000475973 HELZP42694 1942 aaKnown RBP6.44□□□□□ -1.38
UBR4-212ENST00000475973 DMDP11532 3685 aa6.44□□□□□ -1.38
UBR4-212ENST00000475973 FAM186AA6NE01 2351 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 GNG14A0A1W2PPG7 69 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 A0A1W2PPV9 198 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 CENPXA8MT69 81 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 A8MX80 341 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 M0R129 80 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 CASC3O15234 703 aaKnown RBP6.43□□□□□ -1.38
UBR4-212ENST00000475973 VEGFDO43915 354 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 PRKYO43930 277 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 SLC43A1O75387 559 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 MTX2O75431 263 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 CYP7B1O75881 506 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 RAB36O95755 333 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 KRT8P05787 483 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 KLK1P06870 262 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 YES1P07947 543 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 IGFBP1P08833 259 aaPredicted RBP6.43□□□□□ -1.38
UBR4-212ENST00000475973 GSTM3P21266 225 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 BCKDHBP21953 392 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 ERP29P30040 261 aaKnown RBP6.43□□□□□ -1.38
UBR4-212ENST00000475973 GABRA5P31644 462 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 HSD17B2P37059 387 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 ETV5P41161 510 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 PREPP48147 710 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 ETV1P50549 477 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 XKP51811 444 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 NKX2-5P52952 324 aaPredicted RBP6.43□□□□□ -1.38
UBR4-212ENST00000475973 CLDN20P56880 219 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 BTG1P62324 171 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 PPP3R1P63098 170 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 REEP5Q00765 189 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 RPL6Q02878 288 aaKnown RBP6.43□□□□□ -1.38
UBR4-212ENST00000475973 FUT5Q11128 374 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 HEPACAMQ14CZ8 416 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 ZIC1Q15915 447 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 TMEM44Q2T9K0 475 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 TMEM52BQ4KMG9 183 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 KLHL22Q53GT1 634 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 TRIM61Q5EBN2 209 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 RSBN1Q5VWQ0 802 aaPredicted RBP6.43□□□□□ -1.38
UBR4-212ENST00000475973 KHDRBS2Q5VWX1 349 aaKnown RBP6.43□□□□□ -1.38
UBR4-212ENST00000475973 HIST2H2AA3Q6FI13 130 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 LAMTOR1Q6IAA8 161 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 TCEAL6Q6IPX3 200 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 KIAA1161Q6NSJ0 714 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 TMEM220Q6QAJ8 160 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 RASSF6Q6ZTQ3 369 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 C6orf120Q7Z4R8 191 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 TMPRSS11BQ86T26 416 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 KIF18BQ86Y91 864 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 SFTPA1Q8IWL2 248 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 OR2L2Q8NH16 312 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 OR52N1Q8NH53 320 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 VANGL1Q8TAA9 524 aaPredicted RBP6.43□□□□□ -1.38
UBR4-212ENST00000475973 SFXN5Q8TD22 340 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 DNAJA4Q8WW22 397 aaPredicted RBP6.43□□□□□ -1.38
UBR4-212ENST00000475973 PIGKQ92643 395 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 BHMTQ93088 406 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 TCEAL3Q969E4 200 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 SENP5Q96HI0 755 aaPredicted RBP6.43□□□□□ -1.38
UBR4-212ENST00000475973 PRRC1Q96M27 445 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 FOPNLQ96NB1 174 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 DEPDC7Q96QD5 511 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 TIMP4Q99727 224 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 ARHGDIGQ99819 225 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 CNPPD1Q9BV87 410 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 POLR2J2Q9GZM3 115 aaKnown RBP6.43□□□□□ -1.38
UBR4-212ENST00000475973 AICDAQ9GZX7 198 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 POLR2J3Q9H1A7 115 aaKnown RBP6.43□□□□□ -1.38
UBR4-212ENST00000475973 MIR1-1HGQ9H1L0 117 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 OR51B5Q9H339 312 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 SMOC1Q9H4F8 434 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 ZDHHC6Q9H6R6 413 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 MVB12BQ9H7P6 319 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 RNF121Q9H920 327 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 SRA1Q9HD15 236 aaKnown RBP6.43□□□□□ -1.38
UBR4-212ENST00000475973 ABCB9Q9NP78 766 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 TMEM9BQ9NQ34 198 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 RBFOX1Q9NWB1 397 aaKnown RBP6.43□□□□□ -1.38
UBR4-212ENST00000475973 MRPL39Q9NYK5 338 aaKnown RBP6.43□□□□□ -1.38
UBR4-212ENST00000475973 IL20Q9NYY1 176 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 PHF11Q9UIL8 331 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 SLC25A13Q9UJS0 675 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 FBXW2Q9UKT8 454 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 CES1P1Q9UKY3 287 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 SNX7Q9UNH6 387 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 SSR3Q9UNL2 185 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 ITM2BQ9Y287 266 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 SLC27A6Q9Y2P4 619 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 CHST2Q9Y4C5 530 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 MUC22E2RYF6 1773 aaPredicted RBP6.43□□□□□ -1.38
UBR4-212ENST00000475973 PTPRZ1P23471 2315 aaPredicted RBP6.43□□□□□ -1.38
UBR4-212ENST00000475973 GPR179Q6PRD1 2367 aa6.43□□□□□ -1.38
UBR4-212ENST00000475973 FRYLO94915 3013 aa6.42□□□□□ -1.38
UBR4-212ENST00000475973 A0A087WUU8 490 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms