RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 OR5M3Q8NGP4 307 aa20.39■□□□□ 0.85
MCF2L2-209ENST00000475664 XAGE5Q8WWM1 108 aa20.39■□□□□ 0.85
MCF2L2-209ENST00000475664 ADOQ96SZ5 270 aa20.39■□□□□ 0.85
MCF2L2-209ENST00000475664 TRIM8Q9BZR9 551 aa20.39■□□□□ 0.85
MCF2L2-209ENST00000475664 EXD2Q9NVH0 621 aa20.39■□□□□ 0.85
MCF2L2-209ENST00000475664 CORO2BQ9UQ03 480 aa20.39■□□□□ 0.85
MCF2L2-209ENST00000475664 CHCHD2Q9Y6H1 151 aaPredicted RBP20.39■□□□□ 0.85
MCF2L2-209ENST00000475664 TRAV17A0A0B4J275 112 aa20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 EVPLLA8MZ36 301 aa20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 SLC25A12O75746 678 aa20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 AK1P00568 194 aa20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 CPA2P48052 419 aa20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 NUDT2P50583 147 aa20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 MTPNP58546 118 aa20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 DSTNP60981 165 aa20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 FUT5Q11128 374 aa20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 EFR3AQ14156 821 aa20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 CCNJQ5T5M9 372 aa20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 ATAD3BQ5T9A4 648 aa20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 NANOGP8Q6NSW7 305 aa20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 ZAR1Q86SH2 424 aa20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 PSD4Q8NDX1 1056 aa20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 PAQR8Q8TEZ7 354 aa20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 SCMH1Q96GD3 660 aa20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 SECISBP2Q96T21 854 aaKnown RBP20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 NANOGQ9H9S0 305 aa20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 TIMMDC1Q9NPL8 285 aa20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 FBXO34Q9NWN3 711 aa20.38■□□□□ 0.85
MCF2L2-209ENST00000475664 TLN1Q9Y490 2541 aaKnown RBP20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 PRAMEF27A3QJZ7 478 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 TP53I11O14683 189 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 TNFRSF21O75509 655 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 CBX6O95503 412 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 CCL3P10147 92 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 CYP4B1P13584 511 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 CD46P15529 392 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 RFX3P48380 749 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 PSMD4P55036 377 aaKnown RBP20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 ZNF169Q14929 603 aaPredicted RBP20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 ARHGAP11BQ3KRB8 267 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 NADK2Q4G0N4 442 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 SLC6A19Q695T7 634 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 C8orf82Q6P1X6 216 aaPredicted RBP20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 C16orf62Q7Z3J2 963 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 GALNT10Q86SR1 603 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 LSM14AQ8ND56 463 aaKnown RBP20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 OR8J3Q8NGG0 315 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 SPPL2AQ8TCT8 520 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 TMEM125Q96AQ2 219 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 SDF2Q99470 211 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 GPATCH1Q9BRR8 931 aaKnown RBP20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 G6PC3Q9BUM1 346 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 MFRPQ9BY79 579 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 HES7Q9BYE0 225 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 CNOT11Q9UKZ1 510 aaKnown RBP20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 B3GNT3Q9Y2A9 372 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 PCDHGB6Q9Y5F9 930 aa20.37■□□□□ 0.85
MCF2L2-209ENST00000475664 ATRXP46100 2492 aa20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 NME2P1O60361 137 aa20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 SP1P08047 785 aa20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 NUDT7P0C024 238 aa20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 NME2P22392 152 aa20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 SLC6A2P23975 617 aa20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 ART3Q13508 389 aa20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 ZNF766Q5HY98 468 aa20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 RABL3Q5HYI8 236 aa20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 SLC22A10Q63ZE4 541 aa20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 SLC25A25Q6KCM7 469 aa20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 FBXW8Q8N3Y1 598 aa20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 RNF138Q8WVD3 245 aa20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 NSL1Q96IY1 281 aa20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 C5orf34Q96MH7 638 aa20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 NODALQ96S42 347 aa20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 THUMPD3Q9BV44 507 aaKnown RBP20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 KAT8Q9H7Z6 458 aaKnown RBP20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 THUMPD1Q9NXG2 353 aaKnown RBP20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 CNIH4Q9P003 139 aa20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 LIPT1Q9Y234 373 aa20.36■□□□□ 0.85
MCF2L2-209ENST00000475664 BOD1L1Q8NFC6 3051 aa20.35■□□□□ 0.85
MCF2L2-209ENST00000475664 ICOSLGO75144 302 aa20.35■□□□□ 0.85
MCF2L2-209ENST00000475664 LCN1P31025 176 aa20.35■□□□□ 0.85
MCF2L2-209ENST00000475664 RPP38P78345 283 aaKnown RBP20.35■□□□□ 0.85
MCF2L2-209ENST00000475664 MAPK11Q15759 364 aa20.35■□□□□ 0.85
MCF2L2-209ENST00000475664 TMEM81Q6P7N7 255 aa20.35■□□□□ 0.85
MCF2L2-209ENST00000475664 ANKFN1Q8N957 763 aa20.35■□□□□ 0.85
MCF2L2-209ENST00000475664 PNPLA2Q96AD5 504 aa20.35■□□□□ 0.85
MCF2L2-209ENST00000475664 TMCO6Q96DC7 493 aa20.35■□□□□ 0.85
MCF2L2-209ENST00000475664 SH3GL1Q99961 368 aa20.35■□□□□ 0.85
MCF2L2-209ENST00000475664 ZNF350Q9GZX5 532 aa20.35■□□□□ 0.85
MCF2L2-209ENST00000475664 KLHL1Q9NR64 748 aa20.35■□□□□ 0.85
MCF2L2-209ENST00000475664 SACM1LQ9NTJ5 587 aa20.35■□□□□ 0.85
MCF2L2-209ENST00000475664 FLRT3Q9NZU0 649 aa20.35■□□□□ 0.85
MCF2L2-209ENST00000475664 P2RX2Q9UBL9 471 aa20.35■□□□□ 0.85
MCF2L2-209ENST00000475664 IGSF10Q6WRI0 2623 aa20.35■□□□□ 0.85
MCF2L2-209ENST00000475664 C15orf38-AP3S2A0A0A6YYH1 394 aa20.34■□□□□ 0.85
MCF2L2-209ENST00000475664 CCT8L1PA6NM43 557 aa20.34■□□□□ 0.85
MCF2L2-209ENST00000475664 HS6ST1O60243 411 aa20.34■□□□□ 0.85
MCF2L2-209ENST00000475664 UTS2O95399 124 aa20.34■□□□□ 0.85
MCF2L2-209ENST00000475664 ZIC2O95409 532 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms