RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 KCNK2O95069 426 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 LGI1O95970 557 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 IGKV3-11P04433 115 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 ALPLP05186 524 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 DBIP07108 87 aaKnown RBP12.74□□□□□ -0.37
TRAF4-210ENST00000475329 EMP2P54851 167 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 SLC37A1P57057 533 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 GK3PQ14409 553 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 GPR68Q15743 365 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 LIN52Q52LA3 116 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 DCAF12Q5T6F0 453 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 FAAH2Q6GMR7 532 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 NPSR1Q6W5P4 371 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 LANCL3Q6ZV70 420 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 RAB11FIP2Q7L804 512 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 ANKRD37Q7Z713 158 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 VRK2Q86Y07 508 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 MORN4Q8NDC4 146 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 ZNF721Q8TF20 911 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 METTL21AQ8WXB1 218 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 MR1Q95460 341 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 ARHGDIGQ99819 225 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 ZPBPQ9BS86 351 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 RSPO3Q9BXY4 272 aaPredicted RBP12.74□□□□□ -0.37
TRAF4-210ENST00000475329 WDR54Q9H977 334 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 KLHL28Q9NXS3 571 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 SMPD3Q9NY59 655 aaPredicted RBP12.74□□□□□ -0.37
TRAF4-210ENST00000475329 COPS7AQ9UBW8 275 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 C3orf18Q9UK00 162 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 OR10H1Q9Y4A9 318 aa12.74□□□□□ -0.37
TRAF4-210ENST00000475329 AGAP5A6NIR3 686 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 OR6C76A6NM76 312 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 J3KTA2 159 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 M0R3H8 397 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 TNFRSF11BO00300 401 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 DENRO43583 198 aaKnown RBP12.73□□□□□ -0.37
TRAF4-210ENST00000475329 MT-CO3P00414 261 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 CT45A8P0DMV1 189 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 CT45A9P0DMV2 189 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 THRBP10828 461 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 CDK4P11802 303 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 ITIH1P19827 911 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 TGM1P22735 817 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 SLC5A2P31639 672 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 PIGAP37287 484 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 ETV5P41161 510 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 YAP1P46937 504 aaKnown RBP12.73□□□□□ -0.37
TRAF4-210ENST00000475329 CDH12P55289 794 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 PPP2R2BQ00005 443 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 PPP1R8Q12972 351 aaKnown RBP12.73□□□□□ -0.37
TRAF4-210ENST00000475329 MED21Q13503 144 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 FLYWCH1Q4VC44 716 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 CT45A2Q5DJT8 189 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 C6orf52Q5T4I8 152 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 STPG1Q5TH74 334 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 LCN10Q6JVE6 187 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 MRPL14Q6P1L8 145 aaKnown RBP12.73□□□□□ -0.37
TRAF4-210ENST00000475329 FAM198BQ6UWH4 519 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 DEF8Q6ZN54 512 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 ZNF836Q6ZNA1 936 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 GLRX5Q86SX6 157 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 ZNF605Q86T29 641 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 COMTD1Q86VU5 262 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 HS3ST5Q8IZT8 346 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 ZNF321PQ8N8H1 164 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 OR4D11Q8NGI4 311 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 PMEPA1Q969W9 287 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 RDH12Q96NR8 316 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 SPSB2Q99619 263 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 CRB3Q9BUF7 120 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 G6PC3Q9BUM1 346 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 DDA1Q9BW61 102 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 NUDT9Q9BW91 350 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 FBXO34Q9NWN3 711 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 TOR4AQ9NXH8 423 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 KIF17Q9P2E2 1029 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 C19orf25Q9UFG5 118 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-210ENST00000475329 KCND3Q9UK17 655 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 GPR55Q9Y2T6 319 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-210ENST00000475329 ORC6Q9Y5N6 252 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 MAGED1Q9Y5V3 778 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-210ENST00000475329 LYVE1Q9Y5Y7 322 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 OTOGLQ3ZCN5 2332 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 WDFY4Q6ZS81 3184 aa12.73□□□□□ -0.37
TRAF4-210ENST00000475329 CCDC187A0A096LP49 1063 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 FRG2CA6NGY1 282 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 SAGE2PA6NJ88 616 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 DLGAP1O14490 977 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 HS6ST1O60243 411 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 CNOT3O75175 753 aaKnown RBP12.72□□□□□ -0.37
TRAF4-210ENST00000475329 GADD45GO95257 159 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 EPPINO95925 133 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 JMJD7P0C870 316 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 IL7RP16871 459 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 PPICP45877 212 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 RFX3P48380 749 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 PSMD4P55036 377 aaKnown RBP12.72□□□□□ -0.37
TRAF4-210ENST00000475329 SMIM11AP58511 58 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 DCAF7P61962 342 aa12.72□□□□□ -0.37
TRAF4-210ENST00000475329 EEF1A1P68104 462 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms