RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 GLYR1Q49A26 553 aaPredicted RBP11.32□□□□□ -0.6
SKA3-206ENST00000475251 GGTA1PQ4G0N0 100 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 ZNF628Q5EBL2 1059 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 BEND4Q6ZU67 534 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 STK32CQ86UX6 486 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 CENPLQ8N0S6 344 aaPredicted RBP11.32□□□□□ -0.6
SKA3-206ENST00000475251 METTL25Q8N6Q8 603 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 FADS6Q8N9I5 356 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 AKAP1Q92667 903 aaKnown RBP eCLIP11.32□□□□□ -0.6
SKA3-206ENST00000475251 GTPBP3Q969Y2 492 aaKnown RBP11.32□□□□□ -0.6
SKA3-206ENST00000475251 CNRIP1Q96F85 164 aaPredicted RBP11.32□□□□□ -0.6
SKA3-206ENST00000475251 GMPPAQ96IJ6 420 aaPredicted RBP11.32□□□□□ -0.6
SKA3-206ENST00000475251 CDK15Q96Q40 435 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 TACO1Q9BSH4 297 aaKnown RBP11.32□□□□□ -0.6
SKA3-206ENST00000475251 TMEM204Q9BSN7 226 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 REG4Q9BYZ8 158 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 DSN1Q9H410 356 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 BRF2Q9HAW0 419 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 GLRX2Q9NS18 164 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 GIMAP4Q9NUV9 329 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 PAQR5Q9NXK6 330 aaPredicted RBP11.32□□□□□ -0.6
SKA3-206ENST00000475251 TAS2R9Q9NYW1 312 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 SENP1Q9P0U3 644 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 WHRNQ9P202 907 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 UTS2RQ9UKP6 389 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 SLC12A4Q9UP95 1085 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 GPR52Q9Y2T5 361 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 ZNF337Q9Y3M9 751 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 SNX8Q9Y5X2 465 aa11.32□□□□□ -0.6
SKA3-206ENST00000475251 SCO2O43819 266 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 SIX3O95343 332 aaPredicted RBP11.31□□□□□ -0.6
SKA3-206ENST00000475251 ESRRBO95718 433 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 F12P00748 615 aaPredicted RBP11.31□□□□□ -0.6
SKA3-206ENST00000475251 C2P06681 752 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 IL11P20809 199 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 CLDN15P56746 228 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 CORO7P57737 925 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 LTB4RQ15722 352 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 ADAM5Q6NVV9 412 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 STAC2Q6ZMT1 411 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 C22orf34Q6ZV56 151 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 WFDC8Q8IUA0 241 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 OR2M3Q8NG83 312 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 OR52B6Q8NGF0 335 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 UHMK1Q8TAS1 419 aaKnown RBP11.31□□□□□ -0.6
SKA3-206ENST00000475251 FBXW5Q969U6 566 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 EFHD2Q96C19 240 aaPredicted RBP11.31□□□□□ -0.6
SKA3-206ENST00000475251 TM4SF18Q96CE8 201 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 VSTM2LQ96N03 204 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 ZNF681Q96N22 645 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 SHCBP1LQ9BZQ2 653 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 ZBTB26Q9HCK0 441 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 HHATLQ9HCP6 504 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 NGBQ9NPG2 151 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 YAE1D1Q9NRH1 226 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 MRTO4Q9UKD2 239 aaKnown RBP11.31□□□□□ -0.6
SKA3-206ENST00000475251 NFU1Q9UMS0 254 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 SNX6Q9UNH7 406 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 STAB1Q9NY15 2570 aa11.31□□□□□ -0.6
SKA3-206ENST00000475251 OR2M5A3KFT3 312 aa11.3□□□□□ -0.6
SKA3-206ENST00000475251 H0YC42 278 aa11.3□□□□□ -0.6
SKA3-206ENST00000475251 STX16-NPEPL1H3BU86 382 aa11.3□□□□□ -0.6
SKA3-206ENST00000475251 STX16O14662 325 aa11.3□□□□□ -0.6
SKA3-206ENST00000475251 COQ9O75208 318 aa11.3□□□□□ -0.6
SKA3-206ENST00000475251 FESP07332 822 aa11.3□□□□□ -0.6
SKA3-206ENST00000475251 PSMD4P55036 377 aaKnown RBP11.3□□□□□ -0.6
SKA3-206ENST00000475251 TPD52P55327 224 aaPredicted RBP11.3□□□□□ -0.6
SKA3-206ENST00000475251 IRF9Q00978 393 aa11.3□□□□□ -0.6
SKA3-206ENST00000475251 DUSP2Q05923 314 aa11.3□□□□□ -0.6
SKA3-206ENST00000475251 GALNT1Q10472 559 aaPredicted RBP11.3□□□□□ -0.6
SKA3-206ENST00000475251 SGO1Q5FBB7 561 aa11.3□□□□□ -0.6
SKA3-206ENST00000475251 PPP4R4Q6NUP7 873 aa11.3□□□□□ -0.6
SKA3-206ENST00000475251 CREG2Q8IUH2 290 aa11.3□□□□□ -0.6
SKA3-206ENST00000475251 SLC44A2Q8IWA5 706 aaPredicted RBP11.3□□□□□ -0.6
SKA3-206ENST00000475251 CCDC116Q8IYX3 515 aa11.3□□□□□ -0.6
SKA3-206ENST00000475251 PTGR2Q8N8N7 351 aaPredicted RBP11.3□□□□□ -0.6
SKA3-206ENST00000475251 MAPK1IP1LQ8NDC0 245 aa11.3□□□□□ -0.6
SKA3-206ENST00000475251 SELENOMQ8WWX9 145 aa11.3□□□□□ -0.6
SKA3-206ENST00000475251 MTBPQ96DY7 904 aa11.3□□□□□ -0.6
SKA3-206ENST00000475251 C1GALT1C1Q96EU7 318 aa11.3□□□□□ -0.6
SKA3-206ENST00000475251 ACTR6Q9GZN1 396 aa11.3□□□□□ -0.6
SKA3-206ENST00000475251 FOLH1BQ9HBA9 442 aa11.3□□□□□ -0.6
SKA3-206ENST00000475251 BARX1Q9HBU1 254 aaPredicted RBP11.3□□□□□ -0.6
SKA3-206ENST00000475251 MED11Q9P086 117 aa11.3□□□□□ -0.6
SKA3-206ENST00000475251 MCTS1Q9ULC4 181 aaKnown RBP11.3□□□□□ -0.6
SKA3-206ENST00000475251 RNF115Q9Y4L5 304 aa11.3□□□□□ -0.6
SKA3-206ENST00000475251 MXRA5Q9NR99 2828 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 A0A096LPK6 155 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 A8MV72 311 aaPredicted RBP11.29□□□□□ -0.6
SKA3-206ENST00000475251 OVOL3O00110 214 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 PLOD3O60568 738 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 SS18L1O75177 396 aaPredicted RBP11.29□□□□□ -0.6
SKA3-206ENST00000475251 AQP8O94778 261 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 OTCP00480 354 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 PLAUP00749 431 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 RBP1P09455 135 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 PSMB1P20618 241 aaKnown RBP11.29□□□□□ -0.6
SKA3-206ENST00000475251 MPIP34949 423 aa11.29□□□□□ -0.6
SKA3-206ENST00000475251 EIF1AXP47813 144 aaKnown RBP11.29□□□□□ -0.6
SKA3-206ENST00000475251 CLDN20P56880 219 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms