RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 H0YC42 278 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 C16orf97H3BN30 126 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 STX16-NPEPL1H3BU86 382 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 STX16O14662 325 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 ZIC3O60481 467 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 TUBBP07437 444 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 CT45A8P0DMV1 189 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 CT45A9P0DMV2 189 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 TSPAN8P19075 237 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 HK1P19367 917 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 KIR2DL2P43627 348 aaPredicted RBP12.62□□□□□ -0.39
CCDC78-209ENST00000474647 TPD52P55327 224 aaPredicted RBP12.62□□□□□ -0.39
CCDC78-209ENST00000474647 B3GALT5-AS1P59052 145 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 EXOC3L2Q2M3D2 409 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 GGTA1PQ4G0N0 100 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 CT45A2Q5DJT8 189 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 SH2D4BQ5SQS7 431 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 RELL1Q8IUW5 271 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 GSPT2Q8IYD1 628 aaKnown RBP12.62□□□□□ -0.39
CCDC78-209ENST00000474647 OR5M1Q8NGP8 315 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 DSN1Q9H410 356 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 FOLH1BQ9HBA9 442 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 RAB21Q9UL25 225 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 TMCO1Q9UM00 188 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 SNX6Q9UNH7 406 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 PROCRQ9UNN8 238 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 MRPS18CQ9Y3D5 142 aaKnown RBP12.62□□□□□ -0.39
CCDC78-209ENST00000474647 OR10H1Q9Y4A9 318 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 SONP18583 2426 aaKnown RBP12.62□□□□□ -0.39
CCDC78-209ENST00000474647 FREM1Q5H8C1 2179 aa12.62□□□□□ -0.39
CCDC78-209ENST00000474647 ATRQ13535 2644 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 BCAS2O75934 225 aaPredicted RBP12.61□□□□□ -0.39
CCDC78-209ENST00000474647 OTCP00480 354 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 IL3P08700 152 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 NID1P14543 1247 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 EVI2BP34910 448 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 SUCLG1P53597 346 aaKnown RBP12.61□□□□□ -0.39
CCDC78-209ENST00000474647 PNLIPRP2P54317 469 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 GAS1P54826 345 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 EEFSECP57772 596 aaKnown RBP12.61□□□□□ -0.39
CCDC78-209ENST00000474647 ZNF155Q12901 538 aaPredicted RBP12.61□□□□□ -0.39
CCDC78-209ENST00000474647 PON3Q15166 354 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 BCL2A1Q16548 175 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 LETMD1Q6P1Q0 360 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 PLEKHM3Q6ZWE6 761 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 SLC44A2Q8IWA5 706 aaPredicted RBP12.61□□□□□ -0.39
CCDC78-209ENST00000474647 ZNF610Q8N9Z0 462 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 OR4N2Q8NGD1 307 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 FNDC9Q8TBE3 224 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 ZNF675Q8TD23 568 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 TMEM171Q8WVE6 324 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 MTBPQ96DY7 904 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 ZNF681Q96N22 645 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 PARD6BQ9BYG5 372 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 GSX2Q9BZM3 304 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 BRF2Q9HAW0 419 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 GIMAP4Q9NUV9 329 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 NMRK1Q9NWW6 199 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 MED11Q9P086 117 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 ADAM21Q9UKJ8 722 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 CUBNO60494 3623 aa12.61□□□□□ -0.39
CCDC78-209ENST00000474647 GNG14A0A1W2PPG7 69 aa12.6□□□□□ -0.39
CCDC78-209ENST00000474647 PPP6CO00743 305 aa12.6□□□□□ -0.39
CCDC78-209ENST00000474647 EMC8O43402 210 aa12.6□□□□□ -0.39
CCDC78-209ENST00000474647 GMFGO60234 142 aa12.6□□□□□ -0.39
CCDC78-209ENST00000474647 OR4F21O95013 312 aa12.6□□□□□ -0.39
CCDC78-209ENST00000474647 RBP1P09455 135 aa12.6□□□□□ -0.39
CCDC78-209ENST00000474647 PCYT1AP49585 367 aa12.6□□□□□ -0.39
CCDC78-209ENST00000474647 CDH13P55290 713 aa12.6□□□□□ -0.39
CCDC78-209ENST00000474647 TRA2BP62995 288 aaKnown RBP12.6□□□□□ -0.39
CCDC78-209ENST00000474647 MRPS22P82650 360 aaKnown RBP12.6□□□□□ -0.39
CCDC78-209ENST00000474647 TCHHL1Q5QJ38 904 aaPredicted RBP12.6□□□□□ -0.39
CCDC78-209ENST00000474647 C22orf34Q6ZV56 151 aa12.6□□□□□ -0.39
CCDC78-209ENST00000474647 OR2M3Q8NG83 312 aa12.6□□□□□ -0.39
CCDC78-209ENST00000474647 MARK4Q96L34 752 aa12.6□□□□□ -0.39
CCDC78-209ENST00000474647 VSTM2LQ96N03 204 aa12.6□□□□□ -0.39
CCDC78-209ENST00000474647 STMN4Q9H169 189 aaPredicted RBP12.6□□□□□ -0.39
CCDC78-209ENST00000474647 RNF122Q9H9V4 155 aa12.6□□□□□ -0.39
CCDC78-209ENST00000474647 ZNF337Q9Y3M9 751 aa12.6□□□□□ -0.39
CCDC78-209ENST00000474647 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.59□□□□□ -0.39
CCDC78-209ENST00000474647 PCDH7O60245 1069 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 TNFRSF21O75509 655 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 CGAP01215 116 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 RPS17P08708 135 aaKnown RBP12.59□□□□□ -0.39
CCDC78-209ENST00000474647 FAM153BP0C7A2 387 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 CD8BP10966 210 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 TBXA2RP21731 343 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 LOXP28300 417 aaPredicted RBP12.59□□□□□ -0.39
CCDC78-209ENST00000474647 PHBP35232 272 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 RFX3P48380 749 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 NR1H2P55055 460 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 CLDN15P56746 228 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 CLDN20P56880 219 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 RPS3AP61247 264 aaKnown RBP12.59□□□□□ -0.39
CCDC78-209ENST00000474647 PSPHP78330 225 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 FGFBP1Q14512 234 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 GANABQ14697 944 aaKnown RBP12.59□□□□□ -0.39
CCDC78-209ENST00000474647 SGCBQ16585 318 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 FAM153CQ494X1 144 aa12.59□□□□□ -0.39
CCDC78-209ENST00000474647 ZNF704Q6ZNC4 412 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms