RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 DSCR4P56555 118 aaPredicted RBP18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 GAB1Q13480 694 aa18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 DAZAP2Q15038 168 aaPredicted RBP18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 BCL2A1Q16548 175 aa18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 SH2D4BQ5SQS7 431 aa18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 OR5M10Q6IEU7 315 aa18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 GOT1L1Q8NHS2 421 aaPredicted RBP18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 ELP4Q96EB1 424 aa18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 RMND5BQ96G75 393 aaPredicted RBP18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 C3orf14Q9HBI5 128 aa18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 C1orf109Q9NX04 203 aa18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 CBLCQ9ULV8 474 aa18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 MED12LQ86YW9 2145 aa18.47■□□□□ 0.55
PDLIM4-206ENST00000474421 CLCA1A8K7I4 914 aa18.46■□□□□ 0.55
PDLIM4-206ENST00000474421 UPK1AO00322 258 aa18.46■□□□□ 0.55
PDLIM4-206ENST00000474421 ZIC3O60481 467 aa18.46■□□□□ 0.55
PDLIM4-206ENST00000474421 GOSR1O95249 250 aa18.46■□□□□ 0.55
PDLIM4-206ENST00000474421 PSMG1O95456 288 aa18.46■□□□□ 0.55
PDLIM4-206ENST00000474421 CHEK2O96017 543 aa18.46■□□□□ 0.55
PDLIM4-206ENST00000474421 NEFHP12036 1026 aa18.46■□□□□ 0.55
PDLIM4-206ENST00000474421 TACR1P25103 407 aa18.46■□□□□ 0.55
PDLIM4-206ENST00000474421 AGFG1P52594 562 aaKnown RBP18.46■□□□□ 0.55
PDLIM4-206ENST00000474421 GANABQ14697 944 aaKnown RBP18.46■□□□□ 0.55
PDLIM4-206ENST00000474421 PRSS53Q2L4Q9 553 aa18.46■□□□□ 0.55
PDLIM4-206ENST00000474421 RNF165Q6ZSG1 346 aa18.46■□□□□ 0.55
PDLIM4-206ENST00000474421 ZNF764Q96H86 408 aaPredicted RBP18.46■□□□□ 0.55
PDLIM4-206ENST00000474421 LRTM1Q9HBL6 345 aa18.46■□□□□ 0.55
PDLIM4-206ENST00000474421 FAM120CQ9NX05 1096 aaKnown RBP18.46■□□□□ 0.55
PDLIM4-206ENST00000474421 CLCF1Q9UBD9 225 aa18.46■□□□□ 0.55
PDLIM4-206ENST00000474421 CCL27Q9Y4X3 112 aa18.46■□□□□ 0.55
PDLIM4-206ENST00000474421 C2CD3Q4AC94 2353 aa18.46■□□□□ 0.55
PDLIM4-206ENST00000474421 LINC01387J3KSC0 135 aa18.45■□□□□ 0.54
PDLIM4-206ENST00000474421 AZIN1O14977 448 aa18.45■□□□□ 0.54
PDLIM4-206ENST00000474421 EPXP11678 715 aa18.45■□□□□ 0.54
PDLIM4-206ENST00000474421 ZNF708P17019 499 aa18.45■□□□□ 0.54
PDLIM4-206ENST00000474421 STARP49675 285 aa18.45■□□□□ 0.54
PDLIM4-206ENST00000474421 CLDN18P56856 261 aa18.45■□□□□ 0.54
PDLIM4-206ENST00000474421 SLC18A2Q05940 514 aa18.45■□□□□ 0.54
PDLIM4-206ENST00000474421 KIAA0040Q15053 153 aa18.45■□□□□ 0.54
PDLIM4-206ENST00000474421 CLEC6AQ6EIG7 209 aa18.45■□□□□ 0.54
PDLIM4-206ENST00000474421 CHMP1BQ7LBR1 199 aa18.45■□□□□ 0.54
PDLIM4-206ENST00000474421 GRAMD2AQ8IUY3 354 aa18.45■□□□□ 0.54
PDLIM4-206ENST00000474421 FADS6Q8N9I5 356 aa18.45■□□□□ 0.54
PDLIM4-206ENST00000474421 EPS8L3Q8TE67 593 aaKnown RBP18.45■□□□□ 0.54
PDLIM4-206ENST00000474421 NRGNQ92686 78 aa18.45■□□□□ 0.54
PDLIM4-206ENST00000474421 LMF2Q9BU23 707 aaKnown RBP18.45■□□□□ 0.54
PDLIM4-206ENST00000474421 PIGMQ9H3S5 423 aa18.45■□□□□ 0.54
PDLIM4-206ENST00000474421 PTGES2Q9H7Z7 377 aa18.45■□□□□ 0.54
PDLIM4-206ENST00000474421 TNFRSF12AQ9NP84 129 aa18.45■□□□□ 0.54
PDLIM4-206ENST00000474421 ST6GALNAC2Q9UJ37 374 aa18.45■□□□□ 0.54
PDLIM4-206ENST00000474421 SCO2O43819 266 aa18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 FADS1O60427 444 aa18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 TRIM13O60858 407 aa18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 IL33O95760 270 aa18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 PEPDP12955 493 aa18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 CPA2P48052 419 aa18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 IST1P53990 364 aa18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 DIO3P55073 304 aa18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 EEFSECP57772 596 aaKnown RBP18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 C10orf107Q8IVU9 208 aa18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 C4orf33Q8N1A6 199 aa18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 LRRN4CLQ8ND94 238 aa18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 ZFP28Q8NHY6 868 aa18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 INTS12Q96CB8 462 aaKnown RBP18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 CCT7Q99832 543 aa18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 FOXC2Q99958 501 aa18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 RBM24Q9BX46 236 aaKnown RBP18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 DSN1Q9H410 356 aa18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 HHATLQ9HCP6 504 aa18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 RPH3AQ9Y2J0 694 aaPredicted RBP18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 TMED5Q9Y3A6 229 aa18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 ITPR3Q14573 2671 aa18.44■□□□□ 0.54
PDLIM4-206ENST00000474421 ABCA4P78363 2273 aa18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 PDPK1O15530 556 aa18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 HCRTR2O43614 444 aa18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 KCNH1O95259 989 aa18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 CRHP06850 196 aa18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 DDX5P17844 614 aaKnown RBP18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 GPC1P35052 558 aa18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 FOXF2Q12947 444 aa18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 VPS26BQ4G0F5 336 aa18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 FBXW10Q5XX13 1052 aa18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 OR2A2Q6IF42 318 aa18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 P4HA3Q7Z4N8 544 aa18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 CDC20BQ86Y33 519 aa18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 MEIOBQ8N635 442 aa18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 CHDHQ8NE62 594 aaPredicted RBP18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 OR2M3Q8NG83 312 aa18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 CEP70Q8NHQ1 597 aa18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 ZBED6CLQ96FA7 236 aaPredicted RBP18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 EGLN2Q96KS0 407 aa18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 G6PC3Q9BUM1 346 aa18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 C12orf65Q9H3J6 166 aaKnown RBP18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 MKS1Q9NXB0 559 aa18.43■□□□□ 0.54
PDLIM4-206ENST00000474421 TBX19O60806 448 aa18.42■□□□□ 0.54
PDLIM4-206ENST00000474421 PRPS2P11908 318 aa18.42■□□□□ 0.54
PDLIM4-206ENST00000474421 HK1P19367 917 aa18.42■□□□□ 0.54
PDLIM4-206ENST00000474421 TCEA1P23193 301 aaKnown RBP18.42■□□□□ 0.54
PDLIM4-206ENST00000474421 DNASE1P24855 282 aa18.42■□□□□ 0.54
PDLIM4-206ENST00000474421 GABRA3P34903 492 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms