RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 MTF1Q14872 753 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 DUSP5Q16690 384 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 ZNF311Q5JNZ3 666 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 FAM109BQ6ICB4 259 aaPredicted RBP2.34□□□□□ -2.04
XRN1-210ENST00000472697 METAP1DQ6UB28 335 aaPredicted RBP2.34□□□□□ -2.04
XRN1-210ENST00000472697 Q6ZRG5 221 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 LANCL3Q6ZV70 420 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 PTF1AQ7RTS3 328 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 GRASPQ7Z6J2 395 aaPredicted RBP2.34□□□□□ -2.04
XRN1-210ENST00000472697 ACOT1Q86TX2 421 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 FAM131BQ86XD5 332 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 CCDC36Q8IYA8 594 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 LINC00518Q8N0U6 118 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 ZNF491Q8N8L2 437 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 NRACQ8N912 160 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 OR52N5Q8NH56 324 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 PIBF1Q8WXW3 757 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 NRGNQ92686 78 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 SLC25A36Q96CQ1 311 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 HMCESQ96FZ2 354 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 ZNF486Q96H40 463 aaPredicted RBP2.34□□□□□ -2.04
XRN1-210ENST00000472697 TPD52L3Q96J77 140 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 C11orf70Q9BRQ4 267 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 TMEM79Q9BSE2 394 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 NDUFAF3Q9BU61 184 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 FICDQ9BVA6 458 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 C1QTNF7Q9BXJ2 289 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 HIPK2Q9H2X6 1198 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 KRCC1Q9NPI7 259 aaPredicted RBP2.34□□□□□ -2.04
XRN1-210ENST00000472697 GNG12Q9UBI6 72 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 TBC1D24Q9ULP9 559 aa2.34□□□□□ -2.04
XRN1-210ENST00000472697 CSDC2Q9Y534 153 aaKnown RBP2.34□□□□□ -2.04
XRN1-210ENST00000472697 CDHR2Q9BYE9 1310 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 MBLAC1A4D2B0 266 aaPredicted RBP2.33□□□□□ -2.04
XRN1-210ENST00000472697 WRBO00258 174 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 DUX1O43812 170 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 GLRA3O75311 464 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 NDUFS6O75380 124 aaKnown RBP2.33□□□□□ -2.04
XRN1-210ENST00000472697 GRAP2O75791 330 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 CLPXO76031 633 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 IGF1P05019 195 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 TPM1P09493 284 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 ERVK-10P10266 1014 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 DPEP1P16444 411 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 HSD17B2P37059 387 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 SOX3P41225 446 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 MAGEA1P43355 309 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 GNPDA1P46926 289 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 CLDN8P56748 225 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 RIPK4P57078 832 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 ST3GAL1Q11201 340 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 PEX6Q13608 980 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 GTF2H2Q13888 395 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 PDK3Q15120 406 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 PHKG1Q16816 387 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 PRTGQ2VWP7 1150 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 SIRPB2Q5JXA9 342 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 SPANXN4Q5MJ08 99 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 OR4F3Q6IEY1 312 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 GTF2H2CQ6P1K8 395 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 REG3GQ6UW15 175 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 CD164L2Q6UWJ8 174 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 ZNF730Q6ZMV8 503 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 SERINC5Q86VE9 423 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 SERPINA9Q86WD7 417 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 ADHFE1Q8IWW8 467 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 ZNF683Q8IZ20 524 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 PELI3Q8N2H9 469 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 UBE2J2Q8N2K1 259 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 GTPBP8Q8N3Z3 284 aaPredicted RBP2.33□□□□□ -2.04
XRN1-210ENST00000472697 RBMXL3Q8N7X1 1067 aaKnown RBP2.33□□□□□ -2.04
XRN1-210ENST00000472697 DDHD1Q8NEL9 900 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 SEMA6DQ8NFY4 1073 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 ZNF596Q8TC21 504 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 RAET1EQ8TD07 263 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 CCDC107Q8WV48 283 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 APOBEC4Q8WW27 367 aaKnown RBP2.33□□□□□ -2.04
XRN1-210ENST00000472697 PNPLA2Q96AD5 504 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 C17orf77Q96MU5 243 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 PANX2Q96RD6 677 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 S1PR3Q99500 378 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 KRTAP9-3Q9BYQ3 159 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 GANQ9H2C0 597 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 ALG9Q9H6U8 611 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 GPR83Q9NYM4 423 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 UBAP1Q9NZ09 502 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 SIX4Q9UIU6 781 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 ADAM28Q9UKQ2 775 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 VANGL2Q9ULK5 521 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 AMDHD2Q9Y303 409 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 SSC5DA1L4H1 1573 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 SNED1Q8TER0 1413 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 A0A087WUV0 522 aaPredicted RBP2.33□□□□□ -2.04
XRN1-210ENST00000472697 YJEFN3A6XGL0 299 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 ALOX15BO15296 676 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 CTSVO60911 334 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 B3GAT3O94766 335 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 STK17BO94768 372 aa2.33□□□□□ -2.04
XRN1-210ENST00000472697 BAG4O95429 457 aaKnown RBP2.33□□□□□ -2.04
XRN1-210ENST00000472697 ZBTB11O95625 1053 aaPredicted RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms