RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 NUDT21O43809 227 aaKnown RBP2.88□□□□□ -1.95
CD46-213ENST00000471987 RAD51DO75771 328 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 PNPP00491 289 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 PVRP15151 417 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 PSMB1P20618 241 aaKnown RBP2.88□□□□□ -1.95
CD46-213ENST00000471987 DNAJB1P25685 340 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 CCND3P30281 292 aaPredicted RBP2.88□□□□□ -1.95
CD46-213ENST00000471987 ACAA2P42765 397 aaKnown RBP2.88□□□□□ -1.95
CD46-213ENST00000471987 NT5C2P49902 561 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 ARHGDIBP52566 201 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 PLTPP55058 493 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 VCPP55072 806 aaKnown RBP2.88□□□□□ -1.95
CD46-213ENST00000471987 YBEYP58557 167 aaPredicted RBP2.88□□□□□ -1.95
CD46-213ENST00000471987 ARPC4P59998 168 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 KRTAP10-10P60014 251 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 GMFBP60983 142 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 ACTR1AP61163 376 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 MRPS15P82914 257 aaKnown RBP2.88□□□□□ -1.95
CD46-213ENST00000471987 DR1Q01658 176 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 C17orf67Q0P5P2 114 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 CBX3Q13185 183 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 RIPK1Q13546 671 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 NFE2L1Q14494 772 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 LASP1Q14847 261 aaKnown RBP2.88□□□□□ -1.95
CD46-213ENST00000471987 OR1C1Q15619 314 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 DPYSL2Q16555 572 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 ACKR1Q16570 336 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 FUT11Q495W5 492 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 PAGE2BQ5JRK9 111 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 ZYG11AQ6WRX3 759 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 MOB2Q70IA6 237 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 NKAIN4Q8IVV8 208 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 THNSL1Q8IYQ7 743 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 FAM9CQ8IZT9 166 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 HDDC3Q8N4P3 179 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 Q8NFD4 153 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 DEPDC1BQ8WUY9 529 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 C19orf60Q96EN9 201 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 C11orf24Q96F05 449 aaPredicted RBP2.88□□□□□ -1.95
CD46-213ENST00000471987 MTMR9Q96QG7 549 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 S1PR3Q99500 378 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 ZNF559Q9BR84 538 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 KRT23Q9C075 422 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 XKR8Q9H6D3 395 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 ZNF702PQ9H963 129 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 MID1IP1Q9NPA3 183 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 GDAP2Q9NXN4 497 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 AKAP7Q9P0M2 348 aaPredicted RBP2.88□□□□□ -1.95
CD46-213ENST00000471987 GMEB1Q9Y692 573 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 ATP8B3O60423 1300 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 TTC41PQ6P2S7 1318 aa2.88□□□□□ -1.95
CD46-213ENST00000471987 NINLQ9Y2I6 1382 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 A0A0U1RQK1 487 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 RNF103-CHMP3A0A140T963 221 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 ZNF320A2RRD8 509 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 OR6C65A6NJZ3 312 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 MEI4A8MW99 385 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 B4DXG7 233 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 BUB1O43683 1085 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 SULT1B1O43704 296 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 UBTFL6P0CB48 400 aaPredicted RBP2.87□□□□□ -1.95
CD46-213ENST00000471987 TROVE2P10155 538 aaKnown RBP eCLIP2.87□□□□□ -1.95
CD46-213ENST00000471987 HPGDP15428 266 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 HAAOP46952 286 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 EFNA3P52797 238 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 MAP3K7CLP57077 242 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 PPIDQ08752 370 aaKnown RBP2.87□□□□□ -1.95
CD46-213ENST00000471987 IDI1Q13907 227 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 SERTAD2Q14140 314 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 GIT2Q14161 759 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 DOC2AQ14183 400 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 SMU1Q2TAY7 513 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 DDI2Q5TDH0 399 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 GLRX5Q86SX6 157 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 ITIH5Q86UX2 942 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 TGIF2LYQ8IUE0 185 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 SIX6OS1Q8N1H7 587 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 LILRB4Q8NHJ6 448 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 CCDC110Q8TBZ0 833 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 NCLNQ969V3 563 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 DDX50Q9BQ39 737 aaKnown RBP2.87□□□□□ -1.95
CD46-213ENST00000471987 NUSAP1Q9BXS6 441 aaKnown RBP2.87□□□□□ -1.95
CD46-213ENST00000471987 FUT8Q9BYC5 575 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 NFKBIZQ9BYH8 718 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 TSGA10Q9BZW7 698 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 TRIM9Q9C026 710 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 PSTPIP2Q9H939 334 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 ADGRL4Q9HBW9 690 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 GDF3Q9NR23 364 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 POLE3Q9NRF9 147 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 ANO10Q9NW15 660 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 HMG20BQ9P0W2 317 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 ATPIF1Q9UII2 106 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 PSME2Q9UL46 239 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 PIN4Q9Y237 131 aaKnown RBP2.87□□□□□ -1.95
CD46-213ENST00000471987 C15orf41Q9Y2V0 281 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 ATP6V1DQ9Y5K8 247 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 CARMIL1Q5VZK9 1371 aa2.87□□□□□ -1.95
CD46-213ENST00000471987 PRDM2Q13029 1718 aa2.86□□□□□ -1.95
CD46-213ENST00000471987 CDC42BPBQ9Y5S2 1711 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms