RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 CDRT4Q8N9R6 151 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 CEP70Q8NHQ1 597 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 EFHD2Q96C19 240 aaPredicted RBP11.32□□□□□ -0.6
LINC00888-202ENST00000471496 MARK4Q96L34 752 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 MS4A4EQ96PG1 132 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 EBF4Q9BQW3 602 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 DEFB127Q9H1M4 99 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 UBQLN3Q9H347 655 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 ACBD3Q9H3P7 528 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 ZNF703Q9H7S9 590 aaPredicted RBP11.32□□□□□ -0.6
LINC00888-202ENST00000471496 C3orf14Q9HBI5 128 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 GALNT9Q9HCQ5 603 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 ZCCHC3Q9NUD5 404 aaKnown RBP11.32□□□□□ -0.6
LINC00888-202ENST00000471496 GPATCH2Q9NW75 528 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 ERRFI1Q9UJM3 462 aaPredicted RBP11.32□□□□□ -0.6
LINC00888-202ENST00000471496 CBLCQ9ULV8 474 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 LIPGQ9Y5X9 500 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 DIDO1Q9BTC0 2240 aaKnown RBP11.32□□□□□ -0.6
LINC00888-202ENST00000471496 USP9YO00507 2555 aaPredicted RBP11.32□□□□□ -0.6
LINC00888-202ENST00000471496 WIPF3A6NGB9 483 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 E9PBE3 544 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 DIAPH2O60879 1101 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 ICOSLGO75144 302 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 SNX4O95219 450 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 TGDSO95455 350 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 IL33O95760 270 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 IGHG3P01860 377 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 HMGN2P05204 90 aaKnown RBP11.32□□□□□ -0.6
LINC00888-202ENST00000471496 CYP4B1P13584 511 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 GABRA3P34903 492 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 KIR3DL1P43629 444 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 CCT3P49368 545 aaKnown RBP11.32□□□□□ -0.6
LINC00888-202ENST00000471496 MAN2A2P49641 1150 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 DGKQP52824 942 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 GAS1P54826 345 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 PTPN13Q12923 2485 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 SNTA1Q13424 505 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 UBAP2LQ14157 1087 aaKnown RBP11.32□□□□□ -0.6
LINC00888-202ENST00000471496 DUSP5Q16690 384 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 FAM174BQ3ZCQ3 159 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 NXNQ6DKJ4 435 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 ZCCHC12Q6PEW1 402 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 SLC22A16Q86VW1 577 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 GHDCQ8N2G8 530 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 FBXO30Q8TB52 745 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 FAM110BQ8TC76 370 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 PIK3R3Q92569 461 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 OTUB1Q96FW1 271 aaPredicted RBP11.32□□□□□ -0.6
LINC00888-202ENST00000471496 TMEM41AQ96HV5 264 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 RTN4RQ9BZR6 473 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 Q9N2J8 555 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 SDR39U1Q9NRG7 319 aaPredicted RBP11.32□□□□□ -0.6
LINC00888-202ENST00000471496 FLRT3Q9NZU0 649 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 BOKQ9UMX3 212 aaPredicted RBP11.32□□□□□ -0.6
LINC00888-202ENST00000471496 OR10H1Q9Y4A9 318 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 SNX8Q9Y5X2 465 aa11.32□□□□□ -0.6
LINC00888-202ENST00000471496 NCOA6Q14686 2063 aaPredicted RBP11.31□□□□□ -0.6
LINC00888-202ENST00000471496 A0A1B0GTH9 108 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 PRSS51A0A1B0GVH4 220 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 PRAMEF25A6NGN4 478 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 TTC36A6NLP5 189 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 C17orf51A8MQB3 221 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 ACOT7O00154 380 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 FADS1O60427 444 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 SLC19A2O60779 497 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 EDF1O60869 148 aaKnown RBP11.31□□□□□ -0.6
LINC00888-202ENST00000471496 PDE9AO76083 593 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 C1QCP02747 245 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 IDO1P14902 403 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 ENDOUP21128 410 aaKnown RBP11.31□□□□□ -0.6
LINC00888-202ENST00000471496 CLNS1AP54105 237 aaKnown RBP11.31□□□□□ -0.6
LINC00888-202ENST00000471496 RPP38P78345 283 aaKnown RBP11.31□□□□□ -0.6
LINC00888-202ENST00000471496 MRPS22P82650 360 aaKnown RBP11.31□□□□□ -0.6
LINC00888-202ENST00000471496 PRR5P85299 388 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 EFR3AQ14156 821 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 LASP1Q14847 261 aaKnown RBP11.31□□□□□ -0.6
LINC00888-202ENST00000471496 DPY19L1Q2PZI1 675 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 PDCD4Q53EL6 469 aaKnown RBP11.31□□□□□ -0.6
LINC00888-202ENST00000471496 C4orf17Q53FE4 359 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 C1QL3Q5VWW1 255 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 SLC30A6Q6NXT4 461 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 LYPD4Q6UWN0 246 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 ZAR1Q86SH2 424 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 ANKRD46Q86W74 232 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 SPPL2CQ8IUH8 684 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 CLEC4FQ8N1N0 589 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 WDSUB1Q8N9V3 476 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 OR5AK3PQ8NH89 298 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 SFXN5Q8TD22 340 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 RELTQ969Z4 430 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 ZNF597Q96LX8 424 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 GNRHR2Q96P88 292 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 YIPF4Q9BSR8 244 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 OSBPL11Q9BXB4 747 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 SERHL2Q9H4I8 314 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 METTL7AQ9H8H3 244 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 NEUROD4Q9HD90 331 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 FBXO34Q9NWN3 711 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 DOPEY1Q5JWR5 2465 aa11.31□□□□□ -0.6
LINC00888-202ENST00000471496 MED12Q93074 2177 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms