RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 TMEM17Q86X19 198 aa5.55□□□□□ -1.52
SMC5-202ENST00000471372 CARM1Q86X55 608 aa5.55□□□□□ -1.52
SMC5-202ENST00000471372 NBPF5PQ86XG9 351 aaPredicted RBP5.55□□□□□ -1.52
SMC5-202ENST00000471372 ZNF781Q8N8C0 355 aa5.55□□□□□ -1.52
SMC5-202ENST00000471372 MYLPFQ96A32 169 aa5.55□□□□□ -1.52
SMC5-202ENST00000471372 TADA1Q96BN2 335 aa5.55□□□□□ -1.52
SMC5-202ENST00000471372 PELI1Q96FA3 418 aa5.55□□□□□ -1.52
SMC5-202ENST00000471372 ATXN7L3BQ96GX2 97 aa5.55□□□□□ -1.52
SMC5-202ENST00000471372 CNOT6LQ96LI5 555 aaKnown RBP5.55□□□□□ -1.52
SMC5-202ENST00000471372 NODALQ96S42 347 aa5.55□□□□□ -1.52
SMC5-202ENST00000471372 WDR13Q9H1Z4 485 aa5.55□□□□□ -1.52
SMC5-202ENST00000471372 ESM1Q9NQ30 184 aa5.55□□□□□ -1.52
SMC5-202ENST00000471372 DEPPQ9NTK1 212 aa5.55□□□□□ -1.52
SMC5-202ENST00000471372 UFSP2Q9NUQ7 469 aa5.55□□□□□ -1.52
SMC5-202ENST00000471372 ETNK2Q9NVF9 386 aa5.55□□□□□ -1.52
SMC5-202ENST00000471372 SMOXQ9NWM0 555 aa5.55□□□□□ -1.52
SMC5-202ENST00000471372 ONECUT1Q9UBC0 465 aa5.55□□□□□ -1.52
SMC5-202ENST00000471372 SEC14L4Q9UDX3 406 aa5.55□□□□□ -1.52
SMC5-202ENST00000471372 CDH9Q9ULB4 789 aa5.55□□□□□ -1.52
SMC5-202ENST00000471372 EXOGQ9Y2C4 368 aaKnown RBP5.55□□□□□ -1.52
SMC5-202ENST00000471372 TMED5Q9Y3A6 229 aa5.55□□□□□ -1.52
SMC5-202ENST00000471372 MEIOCA2RUB1 952 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 FOXE1O00358 373 aaPredicted RBP5.54□□□□□ -1.52
SMC5-202ENST00000471372 ZNF264O43296 627 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 FCMRO60667 390 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 FRAT2O75474 233 aaPredicted RBP5.54□□□□□ -1.52
SMC5-202ENST00000471372 RHBDL1O75783 438 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 CIB2O75838 187 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 HOXB7P09629 217 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 NCF2P19878 526 aaPredicted RBP5.54□□□□□ -1.52
SMC5-202ENST00000471372 TBXA2RP21731 343 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 CCNCP24863 283 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 HPCAL1P37235 193 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 BDKRB1P46663 353 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 IL9RQ01113 521 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 FHL1Q13642 323 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 ATXN7L3Q14CW9 347 aaPredicted RBP5.54□□□□□ -1.52
SMC5-202ENST00000471372 RAB35Q15286 201 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 Q6ZPB1 254 aaPredicted RBP5.54□□□□□ -1.52
SMC5-202ENST00000471372 PRSS48Q7RTY5 328 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 NUFIP2Q7Z417 695 aaKnown RBP5.54□□□□□ -1.52
SMC5-202ENST00000471372 CNIH3Q8TBE1 160 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 SPPL2AQ8TCT8 520 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 NABP1Q96AH0 204 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 VOPP1Q96AW1 172 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 ZNF501Q96CX3 271 aaPredicted RBP5.54□□□□□ -1.52
SMC5-202ENST00000471372 PIWIL1Q96J94 861 aaKnown RBP5.54□□□□□ -1.52
SMC5-202ENST00000471372 TGM7Q96PF1 710 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 C19orf43Q9BQ61 176 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 POLR3FQ9H1D9 316 aaPredicted RBP5.54□□□□□ -1.52
SMC5-202ENST00000471372 SDF2L1Q9HCN8 221 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 BARHL2Q9NY43 387 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 EIF3LQ9Y262 564 aaKnown RBP5.54□□□□□ -1.52
SMC5-202ENST00000471372 MRPS28Q9Y2Q9 187 aaKnown RBP5.54□□□□□ -1.52
SMC5-202ENST00000471372 FBXO7Q9Y3I1 522 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 WDR81Q562E7 1941 aa5.54□□□□□ -1.52
SMC5-202ENST00000471372 RNF212BA8MTL3 300 aa5.53□□□□□ -1.52
SMC5-202ENST00000471372 E9PBE3 544 aa5.53□□□□□ -1.52
SMC5-202ENST00000471372 TM9SF1O15321 606 aa5.53□□□□□ -1.52
SMC5-202ENST00000471372 PPIHO43447 177 aaKnown RBP5.53□□□□□ -1.52
SMC5-202ENST00000471372 PNMTP11086 282 aa5.53□□□□□ -1.52
SMC5-202ENST00000471372 NCK1P16333 377 aa5.53□□□□□ -1.52
SMC5-202ENST00000471372 STK19P49842 368 aaPredicted RBP5.53□□□□□ -1.52
SMC5-202ENST00000471372 SLC7A2P52569 658 aa5.53□□□□□ -1.52
SMC5-202ENST00000471372 ATP5IP56385 69 aaPredicted RBP5.53□□□□□ -1.52
SMC5-202ENST00000471372 CYCSP99999 105 aaKnown RBP5.53□□□□□ -1.52
SMC5-202ENST00000471372 NCBP1Q09161 790 aaKnown RBP5.53□□□□□ -1.52
SMC5-202ENST00000471372 BST1Q10588 318 aa5.53□□□□□ -1.52
SMC5-202ENST00000471372 IDI1Q13907 227 aa5.53□□□□□ -1.52
SMC5-202ENST00000471372 HSP90AB3PQ58FF7 597 aa5.53□□□□□ -1.52
SMC5-202ENST00000471372 SEL1L2Q5TEA6 688 aa5.53□□□□□ -1.52
SMC5-202ENST00000471372 BBS5Q8N3I7 341 aa5.53□□□□□ -1.52
SMC5-202ENST00000471372 SAMD12Q8N8I0 201 aa5.53□□□□□ -1.52
SMC5-202ENST00000471372 NUP37Q8NFH4 326 aa5.53□□□□□ -1.52
SMC5-202ENST00000471372 STXBP6Q8NFX7 210 aa5.53□□□□□ -1.52
SMC5-202ENST00000471372 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.53□□□□□ -1.52
SMC5-202ENST00000471372 DNAJA3Q96EY1 480 aa5.53□□□□□ -1.52
SMC5-202ENST00000471372 F2RL3Q96RI0 385 aa5.53□□□□□ -1.52
SMC5-202ENST00000471372 THYN1Q9P016 225 aa5.53□□□□□ -1.52
SMC5-202ENST00000471372 RPH3ALQ9UNE2 315 aa5.53□□□□□ -1.52
SMC5-202ENST00000471372 A0A087X002 238 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 A0A0U1RQS6 177 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 OR52A4PA6NMU1 304 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 LCMT2O60294 686 aaKnown RBP5.52□□□□□ -1.53
SMC5-202ENST00000471372 JCHAINP01591 159 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 RPL23AP62750 156 aaKnown RBP5.52□□□□□ -1.53
SMC5-202ENST00000471372 NTHL1P78549 312 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 RPL36AP83881 106 aaKnown RBP5.52□□□□□ -1.53
SMC5-202ENST00000471372 ZNF876PQ49A33 203 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 CYBRD1Q53TN4 286 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 MUC21Q5SSG8 566 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 WLSQ5T9L3 541 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 ACSM5Q6NUN0 579 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 NANOGNBQ7Z5D8 188 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 HSD11B1LQ7Z5J1 315 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 FAM228AQ86W67 206 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 SUMF1Q8NBK3 374 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 OR4D5Q8NGN0 318 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 MOCOSQ96EN8 888 aa5.52□□□□□ -1.53
SMC5-202ENST00000471372 C11orf24Q96F05 449 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms