RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 SLC6A8P48029 635 aa16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 PNLIPRP2P54317 469 aa16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 DLG1Q12959 904 aa16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 GANABQ14697 944 aaKnown RBP16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 ZKSCAN8Q15776 578 aaPredicted RBP16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 ERCC6LQ2NKX8 1250 aa16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 LGSNQ5TDP6 509 aa16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 GOLGA7Q7Z5G4 137 aa16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 CMC1Q7Z7K0 106 aa16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 METTL25Q8N6Q8 603 aa16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 FADS6Q8N9I5 356 aa16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 STEAP2Q8NFT2 490 aa16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 S100PBPQ96BU1 408 aa16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 BTBD9Q96Q07 612 aa16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 OSBPL9Q96SU4 736 aa16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 TRIM31Q9BZY9 425 aa16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 C12orf49Q9H741 205 aa16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 STOML1Q9UBI4 398 aa16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 LPAR3Q9UBY5 353 aa16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 ADAM29Q9UKF5 820 aa16.97■□□□□ 0.31
NCKIPSD-209ENST00000470006 FAM234BA2RU67 622 aa16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 GMFGO60234 142 aa16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 CT45A8P0DMV1 189 aa16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 CT45A9P0DMV2 189 aa16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 GP5P40197 560 aa16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 NUDT6P53370 316 aa16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 CASP9P55211 416 aa16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 DUSP2Q05923 314 aa16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 TMEM249Q2WGJ8 235 aa16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 ZNF672Q499Z4 452 aaPredicted RBP16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 CT45A2Q5DJT8 189 aa16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 SGO1Q5FBB7 561 aa16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 SH2D4BQ5SQS7 431 aa16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 SLC44A2Q8IWA5 706 aaPredicted RBP16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 CTAGE3PQ8IX95 158 aa16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 KLHL7Q8IXQ5 586 aa16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 ZNF619Q8N2I2 560 aa16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 OR52B6Q8NGF0 335 aa16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 UHMK1Q8TAS1 419 aaKnown RBP16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 PYROXD1Q8WU10 500 aa16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 CDK15Q96Q40 435 aa16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 MCTS1Q9ULC4 181 aaKnown RBP16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 SNX8Q9Y5X2 465 aa16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 AP4B1Q9Y6B7 739 aa16.96■□□□□ 0.31
NCKIPSD-209ENST00000470006 IGHV4-30-2A0A087WSY4 118 aa16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 UBFD1O14562 309 aaKnown RBP16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 DLX3O60479 287 aa16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 SS18L1O75177 396 aaPredicted RBP16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 SYNGR4O95473 234 aa16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 ESRRBO95718 433 aa16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 SSTR1P30872 391 aa16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 SPRP35270 261 aaPredicted RBP16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 RUNX1T1Q06455 604 aa16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 ZNF844Q08AG5 666 aa16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 IFT88Q13099 833 aa16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 NCMAPQ5T1S8 102 aa16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 DNM1P46Q6ZS02 220 aa16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 CCDC116Q8IYX3 515 aa16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 L3MBTL4Q8NA19 623 aa16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 KBTBD8Q8NFY9 601 aa16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 OR4N2Q8NGD1 307 aa16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 KAT2AQ92830 837 aa16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 NXNL1Q96CM4 212 aa16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 TNFRSF13CQ96RJ3 184 aa16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 FAIM2Q9BWQ8 316 aa16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 OR10A4Q9H209 315 aa16.95■□□□□ 0.3
NCKIPSD-209ENST00000470006 SHISA8B8ZZ34 492 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 MTHFD2P13995 350 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 PSMB1P20618 241 aaKnown RBP16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 IL32P24001 234 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 CLK3P49761 638 aaKnown RBP16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 CCNG1P51959 295 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 ALDH18A1P54886 795 aaKnown RBP16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 PSPHP78330 225 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 DR1Q01658 176 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 TSC22D1Q15714 1073 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 FRG2Q64ET8 278 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 CLEC2AQ6UVW9 174 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 NPSR1Q6W5P4 371 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 COMMD6Q7Z4G1 85 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 CEP112Q8N8E3 955 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 TRPC4APQ8TEL6 797 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 DUSP19Q8WTR2 217 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 C1GALT1C1Q96EU7 318 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 CNRIP1Q96F85 164 aaPredicted RBP16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 FRG2BQ96QU4 278 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 HDHD5Q9BXW7 423 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 NOL11Q9H8H0 719 aaKnown RBP16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 ZBTB26Q9HCK0 441 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 SENP1Q9P0U3 644 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 CPSF2Q9P2I0 782 aaKnown RBP16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 UTS2RQ9UKP6 389 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 SLC12A4Q9UP95 1085 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 PPP2R2CQ9Y2T4 447 aa16.94■□□□□ 0.3
NCKIPSD-209ENST00000470006 WIPF1O43516 503 aa16.93■□□□□ 0.3
NCKIPSD-209ENST00000470006 SEC31AO94979 1220 aaKnown RBP16.93■□□□□ 0.3
NCKIPSD-209ENST00000470006 SRD5A1P18405 259 aa16.93■□□□□ 0.3
NCKIPSD-209ENST00000470006 IL11P20809 199 aa16.93■□□□□ 0.3
NCKIPSD-209ENST00000470006 PTNP21246 168 aa16.93■□□□□ 0.3
NCKIPSD-209ENST00000470006 CRABP2P29373 138 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms