RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 PYDC1Q8WXC3 89 aa11.81□□□□□ -0.52
TRAF4-208ENST00000469529 CDS1Q92903 461 aa11.81□□□□□ -0.52
TRAF4-208ENST00000469529 NKD1Q969G9 470 aa11.81□□□□□ -0.52
TRAF4-208ENST00000469529 IP6K3Q96PC2 410 aa11.81□□□□□ -0.52
TRAF4-208ENST00000469529 G6PC3Q9BUM1 346 aa11.81□□□□□ -0.52
TRAF4-208ENST00000469529 CHID1Q9BWS9 393 aa11.81□□□□□ -0.52
TRAF4-208ENST00000469529 HOXD1Q9GZZ0 328 aa11.81□□□□□ -0.52
TRAF4-208ENST00000469529 RUBCNLQ9H714 662 aa11.81□□□□□ -0.52
TRAF4-208ENST00000469529 MRTO4Q9UKD2 239 aaKnown RBP11.81□□□□□ -0.52
TRAF4-208ENST00000469529 IGHV1-45A0A0A0MS14 117 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 C2orf92A0A1B0GVN3 265 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 AGAP5A6NIR3 686 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 SOCS6O14544 535 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 CASQ2O14958 399 aaPredicted RBP11.8□□□□□ -0.52
TRAF4-208ENST00000469529 FCMRO60667 390 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 IL33O95760 270 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 CD247P20963 164 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 RPS4Y1P22090 263 aaKnown RBP11.8□□□□□ -0.52
TRAF4-208ENST00000469529 PRKAR1BP31321 381 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 PSMD4P55036 377 aaKnown RBP11.8□□□□□ -0.52
TRAF4-208ENST00000469529 RNF4P78317 190 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 KCNJ10P78508 379 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 KCNC4Q03721 635 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 CHRNEQ04844 493 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 ZNF155Q12901 538 aaPredicted RBP11.8□□□□□ -0.52
TRAF4-208ENST00000469529 DNASE1L3Q13609 305 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 RCN1Q15293 331 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 DUSP7Q16829 419 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 GPAT3Q53EU6 434 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 TBCELQ5QJ74 424 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 FBXW10Q5XX13 1052 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 DHRS4L2Q6PKH6 230 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 HSDL2Q6YN16 418 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 SLC29A4Q7RTT9 530 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 MARCH9Q86YJ5 346 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 C9orf40Q8IXQ3 194 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 ZNF619Q8N2I2 560 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 PQLC1Q8N2U9 271 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 SLC15A4Q8N697 577 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 ZNF321PQ8N8H1 164 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 SLC35B4Q969S0 331 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 C7orf34Q96L11 122 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 TRIM45Q9H8W5 580 aaPredicted RBP11.8□□□□□ -0.52
TRAF4-208ENST00000469529 MMP25Q9NPA2 562 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 NKX1-2Q9UD57 310 aaPredicted RBP11.8□□□□□ -0.52
TRAF4-208ENST00000469529 ZNF223Q9UK11 482 aaPredicted RBP11.8□□□□□ -0.52
TRAF4-208ENST00000469529 CBLCQ9ULV8 474 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 ZNF232Q9UNY5 417 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 DTX4Q9Y2E6 619 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 WDR45Q9Y484 360 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 PCDHGA10Q9Y5H3 936 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 FRYQ5TBA9 3013 aa11.8□□□□□ -0.52
TRAF4-208ENST00000469529 AKAP13Q12802 2813 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 USP24Q9UPU5 2620 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 FER1L5A0AVI2 2057 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 KMT2BQ9UMN6 2715 aaPredicted RBP11.79□□□□□ -0.52
TRAF4-208ENST00000469529 FAM149AA5PLN7 773 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 KIAA0513O60268 411 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 NME6O75414 186 aaPredicted RBP11.79□□□□□ -0.52
TRAF4-208ENST00000469529 ZFAND5O76080 213 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 ZIC2O95409 532 aaPredicted RBP11.79□□□□□ -0.52
TRAF4-208ENST00000469529 LGI1O95970 557 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 DBIP07108 87 aaKnown RBP11.79□□□□□ -0.52
TRAF4-208ENST00000469529 FESP07332 822 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 NGFRP08138 427 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 PABPC4LP0CB38 370 aaKnown RBP11.79□□□□□ -0.52
TRAF4-208ENST00000469529 COX6A1P12074 109 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 FASP25445 335 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 SOX11P35716 441 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 ADH7P40394 386 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 GK3PQ14409 553 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 ZNF141Q15928 474 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 DECR1Q16698 335 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 LRRC23Q53EV4 343 aaPredicted RBP11.79□□□□□ -0.52
TRAF4-208ENST00000469529 IFI44LQ53G44 452 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 HLA-DQA1Q5Y7H0 255 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 FAAH2Q6GMR7 532 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 ENPP6Q6UWR7 440 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 PPP1R32Q7Z5V6 425 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 SLC44A2Q8IWA5 706 aaPredicted RBP11.79□□□□□ -0.52
TRAF4-208ENST00000469529 FAM86B1Q8N7N1 296 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 BCORP1Q8N888 145 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 TMEM102Q8N9M5 508 aaPredicted RBP11.79□□□□□ -0.52
TRAF4-208ENST00000469529 OR11G2Q8NGC1 345 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 FBXO30Q8TB52 745 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 SPPL2AQ8TCT8 520 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 ADAMTS17Q8TE56 1095 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 DOK4Q8TEW6 326 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 PIK3R3Q92569 461 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 ZNF354BQ96LW1 612 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 COL21A1Q96P44 957 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 PINK1Q9BXM7 581 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 RSPO3Q9BXY4 272 aaPredicted RBP11.79□□□□□ -0.52
TRAF4-208ENST00000469529 ITPAQ9BY32 194 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 WWTR1Q9GZV5 400 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 AGPAT4Q9NRZ5 378 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 THSD1Q9NS62 852 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 STOML1Q9UBI4 398 aa11.79□□□□□ -0.52
TRAF4-208ENST00000469529 GXYLT2A0PJZ3 443 aa11.78□□□□□ -0.52
TRAF4-208ENST00000469529 TMEM200CA6NKL6 621 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms