RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	MS4A2	Q01362	244 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	MEP1A	Q16819	746 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	PRICKLE4	Q2TBC4	344 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	ZNF628	Q5EBL2	1059 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	GCNT6	Q5T4J0	391 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	ANGPTL8	Q6UXH0	198 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	GALNT12	Q8IXK2	581 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	LGI4	Q8N135	537 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	BEST3	Q8N1M1	668 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	RNF148	Q8N7C7	305 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	NUP43	Q8NFH3	380 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	OR7G1	Q8NGA0	311 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	ELP5	Q8TE02	316 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	WDR60	Q8WVS4	1066 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	PMM1	Q92871	262 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	UCN3	Q969E3	161 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	AURKB	Q96GD4	344 aa	Predicted RBP	11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	SLC35G5	Q96KT7	338 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	NSMCE2	Q96MF7	247 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	PTCHD1	Q96NR3	888 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	MS4A4E	Q96PG1	132 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	ALOXE3	Q9BYJ1	711 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	OLAH	Q9NV23	265 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	DDX18	Q9NVP1	670 aa	Known RBP	11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	CALML5	Q9NZT1	146 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	PLEKHB1	Q9UF11	243 aa	Predicted RBP	11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	LIPT1	Q9Y234	373 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	CFL2	Q9Y281	166 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	PCDHGB6	Q9Y5F9	930 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	POLE	Q07864	2286 aa		11.16	□□□□□ -0.62
CTNS-205	ENST00000467663	SPTAN1	Q13813	2472 aa	Known RBP	11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	CPAMD8	Q8IZJ3	1885 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	HIVEP3	Q5T1R4	2406 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	TCRBV3S1	A0A5B6	114 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	FAM227A	F5H4B4	570 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	CDK2AP1	O14519	115 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	ARPC2	O15144	300 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	RASAL1	O95294	804 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	AK1	P00568	194 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	C8B	P07358	591 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	GUSB	P08236	651 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	ARAF	P10398	606 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	EFNA1	P20827	205 aa	Predicted RBP	11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	MAOA	P21397	527 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	MATN1	P21941	496 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	TDGF1P3	P51864	188 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	TUBA3C	Q13748	450 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	SELPLG	Q14242	412 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	FCRLB	Q6BAA4	426 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	CDC73	Q6P1J9	531 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	TUBA3E	Q6PEY2	450 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	CCDC80	Q76M96	950 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	RNF130	Q86XS8	419 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	VWA5B2	Q8N398	1253 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	SLC5A8	Q8N695	610 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	CDRT4	Q8N9R6	151 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	TMEM52	Q8NDY8	209 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	HIPK4	Q8NE63	616 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	OR9A2	Q8NGT5	310 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	NR4A3	Q92570	626 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	DAZL	Q92904	295 aa	Known RBP	11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	RIT1	Q92963	219 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	C5orf34	Q96MH7	638 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	STAC	Q99469	402 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	UGT2B28	Q9BY64	529 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	ACTRT3	Q9BYD9	372 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	IKZF5	Q9H5V7	419 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	YY1AP1	Q9H869	796 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	CXorf21	Q9HAI6	301 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	A4GALT	Q9NPC4	353 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	ADAP2	Q9NPF8	381 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	NECTIN3	Q9NQS3	549 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	EXD2	Q9NVH0	621 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	MAT2B	Q9NZL9	334 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	P2RX2	Q9UBL9	471 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	ZNF639	Q9UID6	485 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	RPS6KA6	Q9UK32	745 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	ANGPT4	Q9Y264	503 aa		11.15	□□□□□ -0.62
CTNS-205	ENST00000467663	MAST4	O15021	2626 aa		11.14	□□□□□ -0.63
CTNS-205	ENST00000467663	SAGE2P	A6NJ88	616 aa		11.14	□□□□□ -0.63
CTNS-205	ENST00000467663	UPK1A	O00322	258 aa		11.14	□□□□□ -0.63
CTNS-205	ENST00000467663	CXCR6	O00574	342 aa		11.14	□□□□□ -0.63
CTNS-205	ENST00000467663	MAN1A2	O60476	641 aa		11.14	□□□□□ -0.63
CTNS-205	ENST00000467663	PSMG1	O95456	288 aa		11.14	□□□□□ -0.63
CTNS-205	ENST00000467663	CRYAB	P02511	175 aa	Known RBP	11.14	□□□□□ -0.63
CTNS-205	ENST00000467663	CD96	P40200	585 aa		11.14	□□□□□ -0.63
CTNS-205	ENST00000467663	MC3R	P41968	323 aa		11.14	□□□□□ -0.63
CTNS-205	ENST00000467663	FUT7	Q11130	342 aa		11.14	□□□□□ -0.63
CTNS-205	ENST00000467663	ELAVL1	Q15717	326 aa	Known RBP	11.14	□□□□□ -0.63
CTNS-205	ENST00000467663	C4orf17	Q53FE4	359 aa		11.14	□□□□□ -0.63
CTNS-205	ENST00000467663	ZNF766	Q5HY98	468 aa		11.14	□□□□□ -0.63
CTNS-205	ENST00000467663	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
CTNS-205	ENST00000467663	ATAD3B	Q5T9A4	648 aa		11.14	□□□□□ -0.63
CTNS-205	ENST00000467663	REEP3	Q6NUK4	255 aa		11.14	□□□□□ -0.63
CTNS-205	ENST00000467663	TMEM107	Q6UX40	140 aa		11.14	□□□□□ -0.63
CTNS-205	ENST00000467663	FKBP9P1	Q75LS8	142 aa		11.14	□□□□□ -0.63
CTNS-205	ENST00000467663	PATL1	Q86TB9	770 aa	Known RBP	11.14	□□□□□ -0.63
CTNS-205	ENST00000467663	SPATA24	Q86W54	205 aa		11.14	□□□□□ -0.63
CTNS-205	ENST00000467663	ZZZ3	Q8IYH5	903 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms