RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 FAM166BA8MTA8 275 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 ICOSLGO75144 302 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 KCNK2O95069 426 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 UNC5CO95185 931 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 CYP4B1P13584 511 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 MATN1P21941 496 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 MASP1P48740 699 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 ARFIP2P53365 341 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 SQLEQ14534 574 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 EIF2S3LQ2VIR3 472 aaKnown RBP13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 METTL21CQ5VZV1 264 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 ZNF621Q6ZSS3 439 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 MSANTD1Q6ZTZ1 278 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 TMEM251Q8N6I4 163 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 TRIML2Q8N7C3 387 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 COX18Q8N8Q8 333 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 FAM110BQ8TC76 370 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 CDS1Q92903 461 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 VPS33AQ96AX1 596 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 NTNG2Q96CW9 530 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 TMEM41AQ96HV5 264 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 ZNF597Q96LX8 424 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 ZNF317Q96PQ6 595 aaPredicted RBP13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 SLC35A5Q9BS91 424 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 INPP5KQ9BT40 448 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 BTBD2Q9BX70 525 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 OSBPL11Q9BXB4 747 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 TMEM120AQ9BXJ8 343 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 DEFB127Q9H1M4 99 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 RABEP2Q9H5N1 569 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 RMND5AQ9H871 391 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 GALNT9Q9HCQ5 603 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 TMEM45AQ9NWC5 275 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 PCDHGB3Q9Y5G1 929 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 TENM4Q6N022 2769 aa13.29□□□□□ -0.28
SQSTM1-205ENST00000464493 FLNCQ14315 2725 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 DUXAA6NLW8 204 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 RFXANKO14593 260 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 IGKV1D-16P01601 117 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 GSNP06396 782 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 CHI3L1P36222 383 aaPredicted RBP13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 PTGDSP41222 190 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 CDKN2CP42773 168 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 MAGEA5P43359 124 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 MAN2A2P49641 1150 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 KCNK10P57789 538 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 RPS26P62854 115 aaKnown RBP13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 POU6F2P78424 691 aaPredicted RBP13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 SLC10A1Q14973 349 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 TIGD2Q4W5G0 525 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 AGKQ53H12 422 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 CMPK2Q5EBM0 449 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 CGB2Q6NT52 195 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 FIGNL1Q6PIW4 674 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 BLOC1S3Q6QNY0 202 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 FUNDC1Q8IVP5 155 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 GHDCQ8N2G8 530 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 FAM109AQ8N4B1 249 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 PRR7Q8TB68 274 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 NEURL3Q96EH8 262 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 ITCHQ96J02 903 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 SLC35G5Q96KT7 338 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 GNRHR2Q96P88 292 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 OR7D2Q96RA2 312 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 ZDHHC11Q9H8X9 412 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 SERHLQ9NQF3 203 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 CCDC167Q9P0B6 97 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 B4GALT7Q9UBV7 327 aa13.28□□□□□ -0.28
SQSTM1-205ENST00000464493 POLEQ07864 2286 aa13.27□□□□□ -0.28
SQSTM1-205ENST00000464493 C2orf72A6NCS6 295 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 LRRC3CA6NJW4 275 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 CDC40O60508 579 aaKnown RBP eCLIP13.27□□□□□ -0.293e-6■□□□□ 9.5
SQSTM1-205ENST00000464493 PDE9AO76083 593 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 RFPL3SP0C7P2 107 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 EVI2BP34910 448 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 CLK3P49761 638 aaKnown RBP13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 CASP9P55211 416 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 RBPJQ06330 500 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 SF3A3Q12874 501 aaKnown RBP eCLIP13.27□□□□□ -0.291e-6■■■□□ 15.3
SQSTM1-205ENST00000464493 RCAN2Q14206 197 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 FNDC7Q5VTL7 733 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 SAXO2Q658L1 398 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 TIGD3Q6B0B8 471 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 ANGPTL8Q6UXH0 198 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 GALNT10Q86SR1 603 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 OR5D16Q8NGK9 328 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 OR1J4Q8NGS1 313 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 MIPOL1Q8TD10 442 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 RNF138Q8WVD3 245 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 SPDL1Q96EA4 605 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 G6PC3Q9BUM1 346 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 SERHL2Q9H4I8 314 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 FBXO34Q9NWN3 711 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 FLRT3Q9NZU0 649 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 KLHL14Q9P2G3 628 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 ABCG2Q9UNQ0 655 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 KCNE3Q9Y6H6 103 aa13.27□□□□□ -0.29
SQSTM1-205ENST00000464493 NR5A2O00482 541 aa13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 GNB5O14775 395 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms