RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 TRPV3Q8NET8 790 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 OR13C3Q8NGS6 347 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 FAM81AQ8TBF8 368 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 GIPC3Q8TF64 312 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 GLYATL1Q969I3 302 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 RAB39BQ96DA2 213 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 C8orf76Q96K31 380 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 C10orf90Q96M02 699 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 NDNQ99608 321 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 CHRDL1Q9BU40 450 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 CCDC94Q9BW85 323 aaPredicted RBP3.37□□□□□ -1.87
ITGB1-208ENST00000464001 TRIM9Q9C026 710 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 FAM49AQ9H0Q0 323 aaPredicted RBP3.37□□□□□ -1.87
ITGB1-208ENST00000464001 ELOVL3Q9HB03 270 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 SPACA1Q9HBV2 294 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 MAN2C1Q9NTJ4 1040 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 ACOXLQ9NUZ1 547 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 KLHL28Q9NXS3 571 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 PEF1Q9UBV8 284 aaKnown RBP3.37□□□□□ -1.87
ITGB1-208ENST00000464001 SEC14L3Q9UDX4 400 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 LCMT1Q9UIC8 334 aa3.37□□□□□ -1.87
ITGB1-208ENST00000464001 TRAV18A0A075B6X5 111 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 RNF222A6NCQ9 220 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 GABRR3A8MPY1 467 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 NPIPA3F8WFD2 350 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 GOLGA8TH3BQL2 631 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 K7ERQ8 282 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 CCL24O00175 119 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 CHUKO15111 745 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 SCO2O43819 266 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 LCMT2O60294 686 aaKnown RBP3.36□□□□□ -1.87
ITGB1-208ENST00000464001 SNX3O60493 162 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 GLRA3O75311 464 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 CDK2AP2O75956 126 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 BAG3O95817 575 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 WDPCPO95876 746 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 CHRNA1P02708 482 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 ALPIP09923 528 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 IRF2P14316 349 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 CPN1P15169 458 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 EZRP15311 586 aaKnown RBP3.36□□□□□ -1.87
ITGB1-208ENST00000464001 SRMP19623 302 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 MX1P20591 662 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 LHCGRP22888 699 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 AXLP30530 894 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 ALDH1B1P30837 517 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 FDFT1P37268 417 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 NUMBP49757 651 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 LIMK2P53671 638 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 SEC61GP60059 68 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 NOP14P78316 857 aaKnown RBP3.36□□□□□ -1.87
ITGB1-208ENST00000464001 CACNG1Q06432 222 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 SLC3A1Q07837 685 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 FGL1Q08830 312 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 ZNF415Q09FC8 603 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 PPIL2Q13356 520 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 LY6DQ14210 128 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 TATDN3Q17R31 274 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 ZNF528Q3MIS6 628 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 UGT3A2Q3SY77 523 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 PHLDA2Q53GA4 152 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 ZNF311Q5JNZ3 666 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 LCN1P1Q5VSP4 162 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 CAPN13Q6MZZ7 669 aaPredicted RBP3.36□□□□□ -1.87
ITGB1-208ENST00000464001 C11orf63Q6NUN7 778 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 CDHR3Q6ZTQ4 885 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 TRPM8Q7Z2W7 1104 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 ERO1BQ86YB8 467 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 CBWD2Q8IUF1 395 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 GPR137CQ8N3F9 429 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 OR4K1Q8NGD4 311 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 SLC26A7Q8TE54 656 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 PIGCQ92535 297 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 TMEM45BQ96B21 275 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 HAVCR1Q96D42 359 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 ARL5BQ96KC2 179 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 CXorf58Q96LI9 332 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 AGAP4Q96P64 663 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 VPS35Q96QK1 796 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 PINK1Q9BXM7 581 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 TDRD1Q9BXT4 1180 aaKnown RBP3.36□□□□□ -1.87
ITGB1-208ENST00000464001 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 STRADBQ9C0K7 418 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 OR2B2Q9GZK3 357 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 ZMYND12Q9H0C1 365 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 SLC26A1Q9H2B4 701 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 RIMS4Q9H426 269 aaPredicted RBP3.36□□□□□ -1.87
ITGB1-208ENST00000464001 C5orf66Q9H5L9 145 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 TMEM185BQ9H7F4 350 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 AUNIPQ9H7T9 357 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 GEMIN7Q9H840 131 aaKnown RBP3.36□□□□□ -1.87
ITGB1-208ENST00000464001 PARVGQ9HBI0 331 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 SGK2Q9HBY8 427 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 GPR83Q9NYM4 423 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 GCNT4Q9P109 453 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 DBF4Q9UBU7 674 aaPredicted RBP3.36□□□□□ -1.87
ITGB1-208ENST00000464001 CDH9Q9ULB4 789 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 PPP2R2CQ9Y2T4 447 aa3.36□□□□□ -1.87
ITGB1-208ENST00000464001 TRAV25A0A0B4J276 109 aa3.35□□□□□ -1.87
ITGB1-208ENST00000464001 WASHC1A8K0Z3 465 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms