RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 RNF115Q9Y4L5 304 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 AP4B1Q9Y6B7 739 aa12.98□□□□□ -0.33
SMC1A-204ENST00000463684 C17orf51A8MQB3 221 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 B4DXG7 233 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 TP73O15350 636 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 CLOCKO15516 846 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 FESP07332 822 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 SOD3P08294 240 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 IL11P20809 199 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 EVI2BP34910 448 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 CCNG1P51959 295 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 DUSP2Q05923 314 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 ACAP2Q15057 778 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 FAM180BQ6P0A1 224 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 COMMD6Q7Z4G1 85 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 SLC44A2Q8IWA5 706 aaPredicted RBP12.97□□□□□ -0.33
SMC1A-204ENST00000463684 CCDC116Q8IYX3 515 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 PPM1NQ8N819 430 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 UHMK1Q8TAS1 419 aaKnown RBP12.97□□□□□ -0.33
SMC1A-204ENST00000463684 RAB3IL1Q8TBN0 382 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 RNF138Q8WVD3 245 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 KCTD4Q8WVF5 259 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 TM4SF18Q96CE8 201 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 ERP27Q96DN0 273 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 CNRIP1Q96F85 164 aaPredicted RBP12.97□□□□□ -0.33
SMC1A-204ENST00000463684 HS6ST2Q96MM7 605 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 NTMT1Q9BV86 223 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 AMBRA1Q9C0C7 1298 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 ANKRA2Q9H9E1 313 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 BARX1Q9HBU1 254 aaPredicted RBP12.97□□□□□ -0.33
SMC1A-204ENST00000463684 SAYSD1Q9NPB0 183 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 NGBQ9NPG2 151 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 CLEC4AQ9UMR7 237 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 SLC12A4Q9UP95 1085 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 EXPH5Q8NEV8 1989 aa12.97□□□□□ -0.33
SMC1A-204ENST00000463684 SONP18583 2426 aaKnown RBP12.96□□□□□ -0.33
SMC1A-204ENST00000463684 A0A1W2PP18 115 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 OR7A17O14581 309 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 ADAM11O75078 769 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 SIX3O95343 332 aaPredicted RBP12.96□□□□□ -0.33
SMC1A-204ENST00000463684 ESRRBO95718 433 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 CD3EP07766 207 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 DANCRP0C864 163 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 EIF1AXP47813 144 aaKnown RBP12.96□□□□□ -0.33
SMC1A-204ENST00000463684 CLK3P49761 638 aaKnown RBP12.96□□□□□ -0.33
SMC1A-204ENST00000463684 STX5Q13190 355 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 CTU2Q2VPK5 515 aaKnown RBP12.96□□□□□ -0.33
SMC1A-204ENST00000463684 GLYR1Q49A26 553 aaPredicted RBP12.96□□□□□ -0.33
SMC1A-204ENST00000463684 SGO1Q5FBB7 561 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 KLC3Q6P597 504 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 CCDC91Q7Z6B0 441 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 STEAP2Q8NFT2 490 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 OR52B6Q8NGF0 335 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 LILRB1Q8NHL6 650 aaPredicted RBP12.96□□□□□ -0.33
SMC1A-204ENST00000463684 ZNF675Q8TD23 568 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 VSTM2LQ96N03 204 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 ZNF681Q96N22 645 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 RHNO1Q9BSD3 238 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 HDHD5Q9BXW7 423 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 BEX2Q9BXY8 128 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 ELOVL6Q9H5J4 265 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 ESRP2Q9H6T0 727 aaKnown RBP12.96□□□□□ -0.33
SMC1A-204ENST00000463684 FOLH1BQ9HBA9 442 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 TAS2R9Q9NYW1 312 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 WHRNQ9P202 907 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 CPSF2Q9P2I0 782 aaKnown RBP12.96□□□□□ -0.33
SMC1A-204ENST00000463684 UTS2RQ9UKP6 389 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 MCTS1Q9ULC4 181 aaKnown RBP12.96□□□□□ -0.33
SMC1A-204ENST00000463684 SNX24Q9Y343 169 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 MAGED1Q9Y5V3 778 aaPredicted RBP12.96□□□□□ -0.33
SMC1A-204ENST00000463684 SNX8Q9Y5X2 465 aa12.96□□□□□ -0.33
SMC1A-204ENST00000463684 USF3Q68DE3 2245 aa12.96□□□□□ -0.34
SMC1A-204ENST00000463684 EIF1AYO14602 144 aaKnown RBP12.95□□□□□ -0.34
SMC1A-204ENST00000463684 EIF3HO15372 352 aaKnown RBP eCLIP12.95□□□□□ -0.34
SMC1A-204ENST00000463684 SS18L1O75177 396 aaPredicted RBP12.95□□□□□ -0.34
SMC1A-204ENST00000463684 NME6O75414 186 aaPredicted RBP12.95□□□□□ -0.34
SMC1A-204ENST00000463684 IGHV4-39P01824 125 aa12.95□□□□□ -0.34
SMC1A-204ENST00000463684 GSTA2P09210 222 aa12.95□□□□□ -0.34
SMC1A-204ENST00000463684 TCP1P17987 556 aaKnown RBP12.95□□□□□ -0.34
SMC1A-204ENST00000463684 PSMB1P20618 241 aaKnown RBP12.95□□□□□ -0.34
SMC1A-204ENST00000463684 TRA2BP62995 288 aaKnown RBP12.95□□□□□ -0.34
SMC1A-204ENST00000463684 FAPQ12884 760 aa12.95□□□□□ -0.34
SMC1A-204ENST00000463684 ZNF628Q5EBL2 1059 aa12.95□□□□□ -0.34
SMC1A-204ENST00000463684 NPSR1Q6W5P4 371 aa12.95□□□□□ -0.34
SMC1A-204ENST00000463684 SAMD14Q8IZD0 417 aaPredicted RBP12.95□□□□□ -0.34
SMC1A-204ENST00000463684 OR4N2Q8NGD1 307 aa12.95□□□□□ -0.34
SMC1A-204ENST00000463684 DUSP19Q8WTR2 217 aa12.95□□□□□ -0.34
SMC1A-204ENST00000463684 KAT2AQ92830 837 aa12.95□□□□□ -0.34
SMC1A-204ENST00000463684 C1GALT1C1Q96EU7 318 aa12.95□□□□□ -0.34
SMC1A-204ENST00000463684 KCNK17Q96T54 332 aa12.95□□□□□ -0.34
SMC1A-204ENST00000463684 ALG2Q9H553 416 aa12.95□□□□□ -0.34
SMC1A-204ENST00000463684 ZBTB26Q9HCK0 441 aa12.95□□□□□ -0.34
SMC1A-204ENST00000463684 GLRX2Q9NS18 164 aa12.95□□□□□ -0.34
SMC1A-204ENST00000463684 NMRK1Q9NWW6 199 aa12.95□□□□□ -0.34
SMC1A-204ENST00000463684 PAQR5Q9NXK6 330 aaPredicted RBP12.95□□□□□ -0.34
SMC1A-204ENST00000463684 ABCG2Q9UNQ0 655 aa12.95□□□□□ -0.34
SMC1A-204ENST00000463684 HEATR5AQ86XA9 2040 aa12.95□□□□□ -0.34
SMC1A-204ENST00000463684 FADS1O60427 444 aa12.94□□□□□ -0.34
SMC1A-204ENST00000463684 SYNGR4O95473 234 aa12.94□□□□□ -0.34
SMC1A-204ENST00000463684 SLC6A8P48029 635 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms