RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 FAM92BQ6ZTR7 304 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 VN1R4Q7Z5H5 301 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 CCDC91Q7Z6B0 441 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 LCA5Q86VQ0 697 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 OR4N4Q8N0Y3 316 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 AMER3Q8N944 861 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 AVL9Q8NBF6 648 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 SLC38A9Q8NBW4 561 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 ACBD4Q8NC06 268 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 OR2L3Q8NG85 312 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 C16orf52Q8NHV5 167 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 HMGCLL1Q8TB92 370 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 RDH11Q8TC12 318 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 MCOLN3Q8TDD5 553 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 FAR1Q8WVX9 515 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 LCN9Q8WX39 176 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 LRTOMTQ8WZ04 291 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 COQ8BQ96D53 544 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 C14orf79Q96F83 325 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 MARK4Q96L34 752 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 MAGEB18Q96M61 343 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 PRAP1Q96NZ9 151 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 MAP3K3Q99759 626 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 SORBS1Q9BX66 1292 aaKnown RBP3.37□□□□□ -1.87
SCFD1-204ENST00000463622 NLNQ9BYT8 704 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 DRC3Q9H069 523 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 SRMSQ9H3Y6 488 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 CCDC134Q9H6E4 229 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 MVB12BQ9H7P6 319 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 PDE7BQ9NP56 450 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 MID1IP1Q9NPA3 183 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 CCDC177Q9NQR7 707 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-204ENST00000463622 AGPAT4Q9NRZ5 378 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 TBC1D23Q9NUY8 699 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 DNAJC11Q9NVH1 559 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 SPATA7Q9P0W8 599 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 OPTCQ9UBM4 332 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 G3BP2Q9UN86 482 aaKnown RBP3.37□□□□□ -1.87
SCFD1-204ENST00000463622 CCL27Q9Y4X3 112 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 DNAJC15Q9Y5T4 150 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 PKDREJQ9NTG1 2253 aa3.37□□□□□ -1.87
SCFD1-204ENST00000463622 DIDO1Q9BTC0 2240 aaKnown RBP3.37□□□□□ -1.87
SCFD1-204ENST00000463622 SNRNP200O75643 2136 aaKnown RBP3.37□□□□□ -1.87
SCFD1-204ENST00000463622 A0A0G2JN53 185 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 GOLGA8QA0A0J9YX86 632 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 ATP6AP2A0A1C7CYW4 349 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 GSAPA4D1B5 854 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 GOLGA8OA6NCC3 632 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 SLC9B1P1A6NJY1 282 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 A6NL46 340 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 SYCE1LA8MT33 242 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 F8W8V4 182 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 GOLGA8NF8WBI6 632 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 SDHDO14521 159 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 PIP5K1BO14986 540 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 KLHL41O60662 606 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 SHOX2O60902 331 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 ATP6AP2O75787 350 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 HIST1H2AGP0C0S8 130 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 SLC2A4P14672 509 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 BTF3P20290 206 aaKnown RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 HIST1H2ADP20671 130 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 ACVR2AP27037 513 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 HTR1EP28566 365 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 HNRNPH1P31943 449 aaKnown RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 SHMT2P34897 504 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 CAPZBP47756 277 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 FOXL2P58012 376 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 REEP5Q00765 189 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 HMGCS1Q01581 520 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 PLOD1Q02809 727 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 BTKQ06187 659 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 CDC16Q13042 620 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 LCP2Q13094 533 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 GPS2Q13227 327 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 CHIT1Q13231 466 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 STX3Q13277 289 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 KRT33BQ14525 404 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 ABRAXAS2Q15018 415 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 PDCD2Q16342 344 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 RBBP7Q16576 425 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 SGO1Q5FBB7 561 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 SH2D4BQ5SQS7 431 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 TMEM198Q66K66 360 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 ZNF324BQ6AW86 544 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 IRGCQ6NXR0 463 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 CYB5D1Q6P9G0 228 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 LCTLQ6UWM7 567 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 IGFL2Q6UWQ7 119 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 RGS9BPQ6ZS82 235 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 PRSS41Q7RTY9 318 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 LRRC70Q7Z2Q7 622 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 PAQR7Q86WK9 346 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 WDR75Q8IWA0 830 aaKnown RBP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.36□□□□□ -1.87
SCFD1-204ENST00000463622 WDR20Q8TBZ3 569 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 C10orf82Q8WW14 230 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 SLC5A11Q8WWX8 675 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 SMPDL3AQ92484 453 aa3.36□□□□□ -1.87
SCFD1-204ENST00000463622 UCN3Q969E3 161 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms