RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 RPS17P08708 135 aaKnown RBP17.89■□□□□ 0.45
VARS-221ENST00000463184 CT45A8P0DMV1 189 aa17.89■□□□□ 0.45
VARS-221ENST00000463184 CT45A9P0DMV2 189 aa17.89■□□□□ 0.45
VARS-221ENST00000463184 FPR1P21462 350 aa17.89■□□□□ 0.45
VARS-221ENST00000463184 GRK2P25098 689 aa17.89■□□□□ 0.45
VARS-221ENST00000463184 DPP4P27487 766 aa17.89■□□□□ 0.45
VARS-221ENST00000463184 IL12BP29460 328 aa17.89■□□□□ 0.45
VARS-221ENST00000463184 CD79BP40259 229 aa17.89■□□□□ 0.45
VARS-221ENST00000463184 PNLIPRP2P54317 469 aa17.89■□□□□ 0.45
VARS-221ENST00000463184 CT45A2Q5DJT8 189 aa17.89■□□□□ 0.45
VARS-221ENST00000463184 TNFAIP8L3Q5GJ75 292 aa17.89■□□□□ 0.45
VARS-221ENST00000463184 OR5M10Q6IEU7 315 aa17.89■□□□□ 0.45
VARS-221ENST00000463184 LETMD1Q6P1Q0 360 aa17.89■□□□□ 0.45
VARS-221ENST00000463184 CCDC116Q8IYX3 515 aa17.89■□□□□ 0.45
VARS-221ENST00000463184 SAMD14Q8IZD0 417 aaPredicted RBP17.89■□□□□ 0.45
VARS-221ENST00000463184 C1orf52Q8N6N3 182 aaKnown RBP17.89■□□□□ 0.45
VARS-221ENST00000463184 RNF138Q8WVD3 245 aa17.89■□□□□ 0.45
VARS-221ENST00000463184 APOPT1Q96IL0 206 aa17.89■□□□□ 0.45
VARS-221ENST00000463184 COX4I2Q96KJ9 171 aa17.89■□□□□ 0.45
VARS-221ENST00000463184 CENPHQ9H3R5 247 aa17.89■□□□□ 0.45
VARS-221ENST00000463184 PFDN4Q9NQP4 134 aa17.89■□□□□ 0.45
VARS-221ENST00000463184 VPS29Q9UBQ0 182 aa17.89■□□□□ 0.45
VARS-221ENST00000463184 EMCNQ9ULC0 261 aa17.89■□□□□ 0.45
VARS-221ENST00000463184 DNHD1Q96M86 4753 aa17.88■□□□□ 0.45
VARS-221ENST00000463184 A8MT66 165 aa17.88■□□□□ 0.45
VARS-221ENST00000463184 DEFB108AA8MXU0 73 aa17.88■□□□□ 0.45
VARS-221ENST00000463184 PLIN3O60664 434 aa17.88■□□□□ 0.45
VARS-221ENST00000463184 ESRRBO95718 433 aa17.88■□□□□ 0.45
VARS-221ENST00000463184 LY6G6DO95868 133 aa17.88■□□□□ 0.45
VARS-221ENST00000463184 PROCP04070 461 aa17.88■□□□□ 0.45
VARS-221ENST00000463184 MYZAPP0CAP1 466 aa17.88■□□□□ 0.45
VARS-221ENST00000463184 PEPDP12955 493 aa17.88■□□□□ 0.45
VARS-221ENST00000463184 ATP5F1P24539 256 aaPredicted RBP17.88■□□□□ 0.45
VARS-221ENST00000463184 GAS1P54826 345 aa17.88■□□□□ 0.45
VARS-221ENST00000463184 DSCR4P56555 118 aaPredicted RBP17.88■□□□□ 0.45
VARS-221ENST00000463184 LARP4Q71RC2 724 aaKnown RBP eCLIP17.88■□□□□ 0.45
VARS-221ENST00000463184 RPS27LQ71UM5 84 aaKnown RBP17.88■□□□□ 0.45
VARS-221ENST00000463184 CNEP1R1Q8N9A8 125 aa17.88■□□□□ 0.45
VARS-221ENST00000463184 ZNF483Q8TF39 744 aaPredicted RBP17.88■□□□□ 0.45
VARS-221ENST00000463184 NUDT8Q8WV74 236 aa17.88■□□□□ 0.45
VARS-221ENST00000463184 VSTM2LQ96N03 204 aa17.88■□□□□ 0.45
VARS-221ENST00000463184 FAM111AQ96PZ2 611 aa17.88■□□□□ 0.45
VARS-221ENST00000463184 MED18Q9BUE0 208 aa17.88■□□□□ 0.45
VARS-221ENST00000463184 BDH2Q9BUT1 245 aa17.88■□□□□ 0.45
VARS-221ENST00000463184 IQCGQ9H095 443 aaKnown RBP17.88■□□□□ 0.45
VARS-221ENST00000463184 ELOVL5Q9NYP7 299 aa17.88■□□□□ 0.45
VARS-221ENST00000463184 HEY2Q9UBP5 337 aa17.88■□□□□ 0.45
VARS-221ENST00000463184 MCM8Q9UJA3 840 aa17.88■□□□□ 0.45
VARS-221ENST00000463184 NSD1Q96L73 2696 aaPredicted RBP17.87■□□□□ 0.45
VARS-221ENST00000463184 ARID1AO14497 2285 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 SLC22A20A6NK97 555 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 PPP6CO00743 305 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 SIAH2O43255 324 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 DLX3O60479 287 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 HSD3B1P14060 373 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 CRYGSP22914 178 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 HSD3B2P26439 372 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 CDH13P55290 713 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 CORO7P57737 925 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 EEFSECP57772 596 aaKnown RBP17.87■□□□□ 0.45
VARS-221ENST00000463184 MRPS22P82650 360 aaKnown RBP17.87■□□□□ 0.45
VARS-221ENST00000463184 ACKR1Q16570 336 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 VWA1Q6PCB0 445 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 ZNF474Q6S9Z5 364 aaPredicted RBP17.87■□□□□ 0.45
VARS-221ENST00000463184 HDXQ7Z353 690 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 SLC22A9Q8IVM8 553 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 OR4K17Q8NGC6 315 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 SLC39A3Q9BRY0 314 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 C1QTNF3Q9BXJ4 246 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 STMN4Q9H169 189 aaPredicted RBP17.87■□□□□ 0.45
VARS-221ENST00000463184 ANKRA2Q9H9E1 313 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 KLHL28Q9NXS3 571 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 TRPS1Q9UHF7 1281 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 MID2Q9UJV3 735 aa17.87■□□□□ 0.45
VARS-221ENST00000463184 H7C1Q1 480 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 SPAG7O75391 227 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 MYL2P10916 166 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 TCEA1P23193 301 aaKnown RBP17.86■□□□□ 0.45
VARS-221ENST00000463184 UGT2B10P36537 528 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 KIR2DL2P43627 348 aaPredicted RBP17.86■□□□□ 0.45
VARS-221ENST00000463184 B3GALT5-AS1P59052 145 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 NPSR1Q6W5P4 371 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 ZYG11AQ6WRX3 759 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 BTLAQ7Z6A9 289 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 EXOC3L1Q86VI1 746 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 MEIOBQ8N635 442 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 CCDC63Q8NA47 563 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 OR9A2Q8NGT5 310 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 KAT2AQ92830 837 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 CCDC126Q96EE4 140 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 PIK3IP1Q96FE7 263 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 Q96MF0 132 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 CCL19Q99731 98 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 FOLH1BQ9HBA9 442 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 SSU72Q9NP77 194 aaKnown RBP17.86■□□□□ 0.45
VARS-221ENST00000463184 GIMAP4Q9NUV9 329 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 TAS2R9Q9NYW1 312 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 PPP4R1LQ9P1A2 415 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 ZNF225Q9UK10 706 aa17.86■□□□□ 0.45
VARS-221ENST00000463184 ACTL7BQ9Y614 415 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms