RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 GIPRP48546 466 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 TSPAN31Q12999 210 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 DECR1Q16698 335 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 PTCRAQ6ISU1 281 aaPredicted RBP18.84■□□□□ 0.61
CCM2-203ENST00000461377 ZNF730Q6ZMV8 503 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 DGAT2L6Q6ZPD8 337 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 ZNF367Q7RTV3 350 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 SLC46A3Q7Z3Q1 461 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 TCEANCQ8N8B7 351 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 COX18Q8N8Q8 333 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 HOXB13Q92826 284 aaPredicted RBP18.84■□□□□ 0.61
CCM2-203ENST00000461377 HLA-CQ95604 372 aa18.84■□□□□ 0.61
CCM2-203ENST00000461377 A0A0A6YYC8 382 aaPredicted RBP18.83■□□□□ 0.61
CCM2-203ENST00000461377 I3L1I5 382 aaPredicted RBP18.83■□□□□ 0.61
CCM2-203ENST00000461377 FOXS1O43638 330 aa18.83■□□□□ 0.61
CCM2-203ENST00000461377 CBX7O95931 251 aa18.83■□□□□ 0.61
CCM2-203ENST00000461377 DBIP07108 87 aaKnown RBP18.83■□□□□ 0.61
CCM2-203ENST00000461377 OMPP47874 163 aa18.83■□□□□ 0.61
CCM2-203ENST00000461377 GABRA4P48169 554 aa18.83■□□□□ 0.61
CCM2-203ENST00000461377 PCYT1AP49585 367 aa18.83■□□□□ 0.61
CCM2-203ENST00000461377 ZNF136P52737 540 aa18.83■□□□□ 0.61
CCM2-203ENST00000461377 NXPH1P58417 271 aa18.83■□□□□ 0.61
CCM2-203ENST00000461377 NCS1P62166 190 aa18.83■□□□□ 0.61
CCM2-203ENST00000461377 RPL6Q02878 288 aaKnown RBP18.83■□□□□ 0.61
CCM2-203ENST00000461377 MAPK14Q16539 360 aa18.83■□□□□ 0.61
CCM2-203ENST00000461377 ZNF829Q3KNS6 432 aaPredicted RBP18.83■□□□□ 0.61
CCM2-203ENST00000461377 SLC25A30Q5SVS4 291 aa18.83■□□□□ 0.61
CCM2-203ENST00000461377 MFSD4BQ5TF39 518 aa18.83■□□□□ 0.61
CCM2-203ENST00000461377 MEDAGQ5VYS4 303 aa18.83■□□□□ 0.61
CCM2-203ENST00000461377 GDF7Q7Z4P5 450 aa18.83■□□□□ 0.61
CCM2-203ENST00000461377 ZBTB46Q86UZ6 589 aa18.83■□□□□ 0.61
CCM2-203ENST00000461377 ACOT11Q8WXI4 607 aaPredicted RBP18.83■□□□□ 0.61
CCM2-203ENST00000461377 RPL3LQ92901 407 aaKnown RBP18.83■□□□□ 0.61
CCM2-203ENST00000461377 SLC41A3Q96GZ6 507 aa18.83■□□□□ 0.61
CCM2-203ENST00000461377 ZNF285Q96NJ3 590 aa18.83■□□□□ 0.61
CCM2-203ENST00000461377 MIR1-1HGQ9H1L0 117 aa18.83■□□□□ 0.61
CCM2-203ENST00000461377 TVP23BQ9NYZ1 205 aa18.83■□□□□ 0.61
CCM2-203ENST00000461377 WNT16Q9UBV4 365 aa18.83■□□□□ 0.61
CCM2-203ENST00000461377 TMEM131Q92545 1883 aa18.83■□□□□ 0.6
CCM2-203ENST00000461377 TDRD6O60522 2096 aaKnown RBP18.83■□□□□ 0.6
CCM2-203ENST00000461377 M0R3G1 203 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 CNOT3O75175 753 aaKnown RBP18.82■□□□□ 0.6
CCM2-203ENST00000461377 NTN1O95631 604 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 RNH1P13489 461 aaKnown RBP18.82■□□□□ 0.6
CCM2-203ENST00000461377 MAP4K2Q12851 820 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 ACSM5Q6NUN0 579 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 NKAIN4Q8IVV8 208 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 VWA5B2Q8N398 1253 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 FAM26EQ8N5C1 309 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 PIGXQ8TBF5 258 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 DYNC2LI1Q8TCX1 351 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 GPR151Q8TDV0 419 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 FGF11Q92914 225 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 BORCS5Q969J3 196 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 LGALS12Q96DT0 336 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 SHDQ96IW2 340 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 PLA2G12AQ9BZM1 189 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 FBXO34Q9NWN3 711 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 TAS2R16Q9NYV7 291 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 AQP9O43315 295 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 PRKYO43930 277 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 OR10H2O60403 315 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 COQ9O75208 318 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 BMXP51813 675 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 SMSP52788 366 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 SKP1P63208 163 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 POU6F2P78424 691 aaPredicted RBP18.82■□□□□ 0.6
CCM2-203ENST00000461377 EFNB1P98172 346 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 OGFOD3Q6PK18 319 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 RASSF6Q6ZTQ3 369 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 MRGPREQ86SM8 312 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 MEX3DQ86XN8 651 aaKnown RBP18.82■□□□□ 0.6
CCM2-203ENST00000461377 TOR1AIP2Q8NFQ8 470 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 OR52R1Q8NGF1 315 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 C1orf216Q8TAB5 229 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 PMM1Q92871 262 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 HSPA12BQ96MM6 686 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 RBCK1Q9BYM8 510 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 EGLN3Q9H6Z9 239 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 HCN3Q9P1Z3 774 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 KCNE5Q9UJ90 142 aa18.82■□□□□ 0.6
CCM2-203ENST00000461377 RPL36Q9Y3U8 105 aaKnown RBP18.82■□□□□ 0.6
CCM2-203ENST00000461377 LMO7DNF2Z398 122 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 NKX2-2O95096 273 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 NID1P14543 1247 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 IL9P15248 144 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 S1PR1P21453 382 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 HNRNPKP61978 463 aaKnown RBP eCLIP18.81■□□□□ 0.6
CCM2-203ENST00000461377 ZNF91Q05481 1191 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 ZNF155Q12901 538 aaPredicted RBP18.81■□□□□ 0.6
CCM2-203ENST00000461377 AP1ARQ63HQ0 302 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 NIPAL1Q6NVV3 410 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 SLCO6A1Q86UG4 719 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 FAM46AQ96IP4 442 aaKnown RBP18.81■□□□□ 0.6
CCM2-203ENST00000461377 NELL2Q99435 816 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 POLR2J2Q9GZM3 115 aaKnown RBP18.81■□□□□ 0.6
CCM2-203ENST00000461377 POLE3Q9NRF9 147 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 CNIH4Q9P003 139 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 FBXL21Q9UKT6 434 aa18.81■□□□□ 0.6
CCM2-203ENST00000461377 PLCL2Q9UPR0 1127 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms