RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 OR52R1Q8NGF1 315 aa12.48□□□□□ -0.41
SCAMP4-206ENST00000460767 PPP1R14CQ8TAE6 165 aa12.48□□□□□ -0.41
SCAMP4-206ENST00000460767 NUDT8Q8WV74 236 aa12.48□□□□□ -0.41
SCAMP4-206ENST00000460767 ELP4Q96EB1 424 aa12.48□□□□□ -0.41
SCAMP4-206ENST00000460767 COX4I2Q96KJ9 171 aa12.48□□□□□ -0.41
SCAMP4-206ENST00000460767 SECISBP2Q96T21 854 aaKnown RBP12.48□□□□□ -0.41
SCAMP4-206ENST00000460767 ITPAQ9BY32 194 aa12.48□□□□□ -0.41
SCAMP4-206ENST00000460767 BRINP2Q9C0B6 783 aa12.48□□□□□ -0.41
SCAMP4-206ENST00000460767 DEFB127Q9H1M4 99 aa12.48□□□□□ -0.41
SCAMP4-206ENST00000460767 MIEF1Q9NQG6 463 aa12.48□□□□□ -0.41
SCAMP4-206ENST00000460767 ARGLU1Q9NWB6 273 aaPredicted RBP12.48□□□□□ -0.41
SCAMP4-206ENST00000460767 BEX4Q9NWD9 120 aaPredicted RBP12.48□□□□□ -0.41
SCAMP4-206ENST00000460767 PRODH2Q9UF12 536 aa12.48□□□□□ -0.41
SCAMP4-206ENST00000460767 CNOT11Q9UKZ1 510 aaKnown RBP12.48□□□□□ -0.41
SCAMP4-206ENST00000460767 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 FRG2CA6NGY1 282 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 HMGB1P1B2RPK0 211 aaPredicted RBP12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 BCAS2O75934 225 aaPredicted RBP12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 MAPK1P28482 360 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 ASCL1P50553 236 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 DIO3P55073 304 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 CLDN8P56748 225 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 DCAF7P61962 342 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 PSG6Q00889 435 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 KEAP1Q14145 624 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 RPS6KA2Q15349 733 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 PDCD2Q16342 344 aaPredicted RBP12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 FNDC7Q5VTL7 733 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 IL23RQ5VWK5 629 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 ANKRD26P1Q6NSI1 321 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 ZNF585AQ6P3V2 769 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 Q71RC1 249 aaPredicted RBP12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 FAM9CQ8IZT9 166 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 TAGAPQ8N103 731 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 FBXW8Q8N3Y1 598 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 LIX1Q8N485 282 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 RELL2Q8NC24 303 aaPredicted RBP12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 CLHC1Q8NHS4 586 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 ZNF75CPQ92670 426 aaPredicted RBP12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 KAT2AQ92830 837 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 RNASE6Q93091 150 aaKnown RBP12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 HGDQ93099 445 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 GFM2Q969S9 779 aaKnown RBP12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 CIDECQ96AQ7 238 aaPredicted RBP12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 SARAFQ96BY9 339 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 TUBGCP3Q96CW5 907 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 HSPBAP1Q96EW2 488 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 GIMAP5Q96F15 307 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 LRRC46Q96FV0 321 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 LCORQ96JN0 433 aaPredicted RBP12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 GAL3ST4Q96RP7 486 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 MANSC1Q9H8J5 431 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 PLEKHF2Q9H8W4 249 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 IL1RL2Q9HB29 575 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 NEUROD4Q9HD90 331 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 SIRT3Q9NTG7 399 aaPredicted RBP12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 GIMAP4Q9NUV9 329 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 NKIRAS1Q9NYS0 192 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 ERVK-11Q9UQG0 969 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 NPFFR2Q9Y5X5 522 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 LIPGQ9Y5X9 500 aa12.47□□□□□ -0.41
SCAMP4-206ENST00000460767 VPS13CQ709C8 3753 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 HRNRQ86YZ3 2850 aaPredicted RBP12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 LRRC3CA6NJW4 275 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 HSPB2A8KAH6 182 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 HDAC3O15379 428 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 HCN1O60741 890 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 SCN2BO60939 215 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 TRIM3O75382 744 aaPredicted RBP12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 NME6O75414 186 aaPredicted RBP12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 LRATO95237 230 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 ABCB1P08183 1280 aaPredicted RBP12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 ALDOCP09972 364 aaKnown RBP12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 LAMP1P11279 417 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 G6PDP11413 515 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 PRPS1L1P21108 318 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 CNR1P21554 472 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 MC3RP41968 323 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 NCBP2P52298 156 aaKnown RBP eCLIP12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 WNT3P56703 355 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 PSPHP78330 225 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 PLGLB1Q02325 96 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 HSPB2Q16082 182 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 TMEM64Q6YI46 380 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 ZNF551Q7Z340 670 aaPredicted RBP12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 WDR53Q7Z5U6 358 aaPredicted RBP12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 KRTCAP2Q8N6L1 136 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 FNDC5Q8NAU1 212 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 OR5M9Q8NGP3 310 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 SPPL2AQ8TCT8 520 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 MGARPQ8TDB4 240 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 PPCDCQ96CD2 204 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 SLC35A4Q96G79 324 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 C7orf26Q96N11 449 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 BBS4Q96RK4 519 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 FAM173AQ9BQD7 235 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 LMF2Q9BU23 707 aaKnown RBP12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 C1orf50Q9BV19 199 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 NUF2Q9BZD4 464 aa12.46□□□□□ -0.41
SCAMP4-206ENST00000460767 FOLH1BQ9HBA9 442 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms