RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 GANABQ14697 944 aaKnown RBP20.64■□□□□ 0.89
PTPN4-207ENST00000460162 SH2D4BQ5SQS7 431 aa20.64■□□□□ 0.89
PTPN4-207ENST00000460162 NOXRED1Q6NXP6 359 aa20.64■□□□□ 0.89
PTPN4-207ENST00000460162 CDC20BQ86Y33 519 aa20.64■□□□□ 0.89
PTPN4-207ENST00000460162 FADS6Q8N9I5 356 aa20.64■□□□□ 0.89
PTPN4-207ENST00000460162 CCDC63Q8NA47 563 aa20.64■□□□□ 0.89
PTPN4-207ENST00000460162 UBLCP1Q8WVY7 318 aaPredicted RBP20.64■□□□□ 0.89
PTPN4-207ENST00000460162 ZNF764Q96H86 408 aaPredicted RBP20.64■□□□□ 0.89
PTPN4-207ENST00000460162 AMDHD1Q96NU7 426 aa20.64■□□□□ 0.89
PTPN4-207ENST00000460162 GLIPR2Q9H4G4 154 aa20.64■□□□□ 0.89
PTPN4-207ENST00000460162 Q9N2J8 555 aa20.64■□□□□ 0.89
PTPN4-207ENST00000460162 MID2Q9UJV3 735 aa20.64■□□□□ 0.89
PTPN4-207ENST00000460162 PRRC2AP48634 2157 aaKnown RBP20.63■□□□□ 0.89
PTPN4-207ENST00000460162 SETD2Q9BYW2 2564 aaPredicted RBP20.63■□□□□ 0.89
PTPN4-207ENST00000460162 UPK1AO00322 258 aa20.63■□□□□ 0.89
PTPN4-207ENST00000460162 SCO2O43819 266 aa20.63■□□□□ 0.89
PTPN4-207ENST00000460162 STARP49675 285 aa20.63■□□□□ 0.89
PTPN4-207ENST00000460162 EEF1A1P68104 462 aaKnown RBP20.63■□□□□ 0.89
PTPN4-207ENST00000460162 GAB1Q13480 694 aa20.63■□□□□ 0.89
PTPN4-207ENST00000460162 ZNHIT3Q15649 155 aaPredicted RBP20.63■□□□□ 0.89
PTPN4-207ENST00000460162 BCL2A1Q16548 175 aa20.63■□□□□ 0.89
PTPN4-207ENST00000460162 DECR1Q16698 335 aa20.63■□□□□ 0.89
PTPN4-207ENST00000460162 EEF1A1P5Q5VTE0 462 aa20.63■□□□□ 0.89
PTPN4-207ENST00000460162 LIPMQ5VYY2 423 aa20.63■□□□□ 0.89
PTPN4-207ENST00000460162 GRAMD2AQ8IUY3 354 aa20.63■□□□□ 0.89
PTPN4-207ENST00000460162 LMF2Q9BU23 707 aaKnown RBP20.63■□□□□ 0.89
PTPN4-207ENST00000460162 RBM24Q9BX46 236 aaKnown RBP20.63■□□□□ 0.89
PTPN4-207ENST00000460162 PIGMQ9H3S5 423 aa20.63■□□□□ 0.89
PTPN4-207ENST00000460162 TNFRSF12AQ9NP84 129 aa20.63■□□□□ 0.89
PTPN4-207ENST00000460162 SDHAF3Q9NRP4 125 aa20.63■□□□□ 0.89
PTPN4-207ENST00000460162 CCM2LQ9NUG4 571 aaPredicted RBP20.63■□□□□ 0.89
PTPN4-207ENST00000460162 MRTO4Q9UKD2 239 aaKnown RBP20.63■□□□□ 0.89
PTPN4-207ENST00000460162 CCL27Q9Y4X3 112 aa20.63■□□□□ 0.89
PTPN4-207ENST00000460162 TTC36A6NLP5 189 aa20.62■□□□□ 0.89
PTPN4-207ENST00000460162 COPEO14579 308 aa20.62■□□□□ 0.89
PTPN4-207ENST00000460162 FADS1O60427 444 aa20.62■□□□□ 0.89
PTPN4-207ENST00000460162 ZIC3O60481 467 aa20.62■□□□□ 0.89
PTPN4-207ENST00000460162 CPA3P15088 417 aa20.62■□□□□ 0.89
PTPN4-207ENST00000460162 CPA2P48052 419 aa20.62■□□□□ 0.89
PTPN4-207ENST00000460162 PSMD4P55036 377 aaKnown RBP20.62■□□□□ 0.89
PTPN4-207ENST00000460162 B3GALT5-AS1P59052 145 aa20.62■□□□□ 0.89
PTPN4-207ENST00000460162 GCNT2Q8N0V5 402 aa20.62■□□□□ 0.89
PTPN4-207ENST00000460162 CHDHQ8NE62 594 aaPredicted RBP20.62■□□□□ 0.89
PTPN4-207ENST00000460162 OR2M3Q8NG83 312 aa20.62■□□□□ 0.89
PTPN4-207ENST00000460162 INTS12Q96CB8 462 aaKnown RBP20.62■□□□□ 0.89
PTPN4-207ENST00000460162 ELP4Q96EB1 424 aa20.62■□□□□ 0.89
PTPN4-207ENST00000460162 LIME1Q9H400 295 aa20.62■□□□□ 0.89
PTPN4-207ENST00000460162 FAM120CQ9NX05 1096 aaKnown RBP20.62■□□□□ 0.89
PTPN4-207ENST00000460162 GALNT8Q9NY28 637 aa20.62■□□□□ 0.89
PTPN4-207ENST00000460162 RPH3AQ9Y2J0 694 aaPredicted RBP20.62■□□□□ 0.89
PTPN4-207ENST00000460162 MPDZO75970 2070 aa20.62■□□□□ 0.89
PTPN4-207ENST00000460162 SMIM23A6NLE4 172 aa20.61■□□□□ 0.89
PTPN4-207ENST00000460162 IL33O95760 270 aa20.61■□□□□ 0.89
PTPN4-207ENST00000460162 NEFHP12036 1026 aa20.61■□□□□ 0.89
PTPN4-207ENST00000460162 DNASE1P24855 282 aa20.61■□□□□ 0.89
PTPN4-207ENST00000460162 KIAA0040Q15053 153 aa20.61■□□□□ 0.89
PTPN4-207ENST00000460162 FBXW10Q5XX13 1052 aa20.61■□□□□ 0.89
PTPN4-207ENST00000460162 PAMR1Q6UXH9 720 aa20.61■□□□□ 0.89
PTPN4-207ENST00000460162 RNF165Q6ZSG1 346 aa20.61■□□□□ 0.89
PTPN4-207ENST00000460162 LRRN4CLQ8ND94 238 aa20.61■□□□□ 0.89
PTPN4-207ENST00000460162 EPS8L3Q8TE67 593 aaKnown RBP20.61■□□□□ 0.89
PTPN4-207ENST00000460162 CCT7Q99832 543 aa20.61■□□□□ 0.89
PTPN4-207ENST00000460162 C3orf14Q9HBI5 128 aa20.61■□□□□ 0.89
PTPN4-207ENST00000460162 C1orf109Q9NX04 203 aa20.61■□□□□ 0.89
PTPN4-207ENST00000460162 PACSIN3Q9UKS6 424 aa20.61■□□□□ 0.89
PTPN4-207ENST00000460162 C17orf51A8MQB3 221 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 SLC28A1O00337 649 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 PDPK1O15530 556 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 RGS14O43566 566 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 SEC22BO75396 215 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 PEPDP12955 493 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 KRT4P19013 534 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 TCEA1P23193 301 aaKnown RBP20.6■□□□□ 0.89
PTPN4-207ENST00000460162 CLK3P49761 638 aaKnown RBP20.6■□□□□ 0.89
PTPN4-207ENST00000460162 DIO3P55073 304 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 RAET1LQ5VY80 246 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 CLEC6AQ6EIG7 209 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 PLXDC2Q6UX71 529 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 LUZP2Q86TE4 346 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 HOMEZQ8IX15 550 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 LINC01560Q8TB33 94 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.6■□□□□ 0.89
PTPN4-207ENST00000460162 FCRL1Q96LA6 429 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 ALPK1Q96QP1 1244 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 TRMOQ9BU70 441 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 DSN1Q9H410 356 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 PTGES2Q9H7Z7 377 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 LRTM1Q9HBL6 345 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 PLEKHA6Q9Y2H5 1048 aa20.6■□□□□ 0.89
PTPN4-207ENST00000460162 NF1P21359 2839 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 ABCA4P78363 2273 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 LINC01387J3KSC0 135 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 AZIN1O14977 448 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 TNFSF13O75888 250 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 CRHP06850 196 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 SLC18A2Q05940 514 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 HSPB3Q12988 150 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 PCLAFQ15004 111 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 OR2A2Q6IF42 318 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms