RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 PRAMEF27A3QJZ7 478 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 BLACEA4D250 179 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 FAM86C2PA6NEL3 165 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 ANTXRLA6NF34 631 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 HMX3A6NHT5 357 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 CTDSP2O14595 271 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 CASKO14936 926 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 SURF4O15260 269 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 KLF4O43474 513 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 TNFSF14O43557 240 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 RNGTTO60942 597 aaKnown RBP8.28□□□□□ -1.08
HDAC3-202ENST00000459727 TMCC2O75069 709 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 COQ9O75208 318 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 APBB3O95704 486 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 HLA-DQB1P01920 261 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 PRKAR1AP10644 381 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 BMP7P18075 431 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 CPN2P22792 545 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 FCARP24071 287 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 CERS1P27544 350 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 ATP6V1E1P36543 226 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 ETV5P41161 510 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 MC3RP41968 323 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 MLLT3P42568 568 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-202ENST00000459727 HTR3AP46098 478 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 ETV1P50549 477 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 RNF144AP50876 292 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-202ENST00000459727 ACTC1P68032 377 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 ACTA1P68133 377 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 QPRTQ15274 297 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 LRIT3Q3SXY7 679 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 GLYR1Q49A26 553 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-202ENST00000459727 CRTC2Q53ET0 693 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-202ENST00000459727 SOWAHCQ53LP3 525 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-202ENST00000459727 AADACL4Q5VUY2 407 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 TRIQKQ629K1 86 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 ACSM5Q6NUN0 579 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 PAMR1Q6UXH9 720 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 USP53Q70EK8 1073 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 RBM45Q8IUH3 476 aaKnown RBP8.28□□□□□ -1.08
HDAC3-202ENST00000459727 ZNF619Q8N2I2 560 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 IQCF1Q8N6M8 205 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 CDRT4Q8N9R6 151 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 C19orf18Q8NEA5 215 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 ENKURQ8TC29 256 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 OIT3Q8WWZ8 545 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 SLC9A6Q92581 669 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 SLC41A3Q96GZ6 507 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 ZNF486Q96H40 463 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-202ENST00000459727 ZC3HAV1LQ96H79 300 aaKnown RBP8.28□□□□□ -1.08
HDAC3-202ENST00000459727 DIRAS2Q96HU8 199 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 SDHCQ99643 169 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-202ENST00000459727 BARHL1Q9BZE3 327 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 PIGUQ9H490 435 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 RNF167Q9H6Y7 350 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 DUSP22Q9NRW4 184 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 TM7SF3Q9NS93 570 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 FBXL12Q9NXK8 326 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 TNFRSF10DQ9UBN6 386 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 PCDHGB7Q9Y5F8 929 aa8.28□□□□□ -1.08
HDAC3-202ENST00000459727 PCYT1BQ9Y5K3 369 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-202ENST00000459727 NOTCH4Q99466 2003 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 A0A1W2PQL4 384 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-202ENST00000459727 OTOL1A6NHN0 477 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-202ENST00000459727 SLC22A31A6NKX4 558 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 TTC36A6NLP5 189 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 WASHC1A8K0Z3 465 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 CENPXA8MT69 81 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 FAM25AB3EWG3 89 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 FAM25CB3EWG5 89 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 FAM25GB3EWG6 89 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 H3BQ06 376 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-202ENST00000459727 POLR1CO15160 346 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-202ENST00000459727 PGRMC2O15173 223 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 IDH3BO43837 385 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 STX11O75558 287 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 RGS9O75916 674 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-202ENST00000459727 EPPINO95925 133 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 PAK4O96013 591 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-202ENST00000459727 ATP1B1P05026 303 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 ALPPL2P10696 532 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 RPS4Y1P22090 263 aaKnown RBP8.27□□□□□ -1.09
HDAC3-202ENST00000459727 NTSR1P30989 418 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 IGFALSP35858 605 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 TALDO1P37837 337 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 GCGRP47871 477 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 MTNR1BP49286 362 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 INPP1P49441 399 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 GAS1P54826 345 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 YPEL5P62699 121 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 BTN3A2P78410 334 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 CHRNEQ04844 493 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 MESP2Q0VG99 397 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 NFATC4Q14934 902 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 PUS10Q3MIT2 529 aaKnown RBP8.27□□□□□ -1.09
HDAC3-202ENST00000459727 ZFP69Q49AA0 526 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 ZNF628Q5EBL2 1059 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 TIGD3Q6B0B8 471 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 C22orf42Q6IC83 251 aa8.27□□□□□ -1.09
HDAC3-202ENST00000459727 TYW3Q6IPR3 259 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms