RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 EPGNQ6UW88 154 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 RPTNQ6XPR3 784 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 DOLPP1Q86YN1 238 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 COX18Q8N8Q8 333 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 ADAMTS15Q8TE58 950 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 JADE3Q92613 823 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 NTNG2Q96CW9 530 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 GIMAP5Q96F15 307 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 GNRHR2Q96P88 292 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 G6PC3Q9BUM1 346 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 TP63Q9H3D4 680 aaPredicted RBP14.77□□□□□ -0.05
CD28-203ENST00000458610 PIGUQ9H490 435 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 DUSP22Q9NRW4 184 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 FAM120CQ9NX05 1096 aaKnown RBP14.77□□□□□ -0.05
CD28-203ENST00000458610 SH3BGRL2Q9UJC5 107 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 GPR45Q9Y5Y3 372 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 ZGRF1Q86YA3 2104 aa14.77□□□□□ -0.05
CD28-203ENST00000458610 UBR5O95071 2799 aaPredicted RBP14.76□□□□□ -0.05
CD28-203ENST00000458610 NPIPA2E9PIF3 369 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 E9PLN8 166 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 NPIPA3F8WFD2 350 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 POLR3GO15318 223 aaPredicted RBP14.76□□□□□ -0.05
CD28-203ENST00000458610 SLC22A3O75751 556 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 CPSF4O95639 269 aaKnown RBP14.76□□□□□ -0.05
CD28-203ENST00000458610 IL6P05231 212 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 HOXD4P09016 255 aaPredicted RBP14.76□□□□□ -0.05
CD28-203ENST00000458610 ALDOCP09972 364 aaKnown RBP14.76□□□□□ -0.05
CD28-203ENST00000458610 SOAT1P35610 550 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 RFX3P48380 749 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 UFM1P61960 85 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 HBA1P69905 142 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 IRX1P78414 480 aaPredicted RBP14.76□□□□□ -0.05
CD28-203ENST00000458610 POU6F2P78424 691 aaPredicted RBP14.76□□□□□ -0.05
CD28-203ENST00000458610 LASP1Q14847 261 aaKnown RBP14.76□□□□□ -0.05
CD28-203ENST00000458610 SF3B4Q15427 424 aaKnown RBP eCLIP14.76□□□□□ -0.05
CD28-203ENST00000458610 FAM174BQ3ZCQ3 159 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 GXYLT1Q4G148 440 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 SLC9B1Q4ZJI4 515 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 PDCD4Q53EL6 469 aaKnown RBP14.76□□□□□ -0.05
CD28-203ENST00000458610 WLSQ5T9L3 541 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 CDC73Q6P1J9 531 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 WDR53Q7Z5U6 358 aaPredicted RBP14.76□□□□□ -0.05
CD28-203ENST00000458610 PLCZ1Q86YW0 608 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 CHERPQ8IWX8 916 aaKnown RBP14.76□□□□□ -0.05
CD28-203ENST00000458610 TRIML2Q8N7C3 387 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 SLC16A11Q8NCK7 471 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 OR4A15Q8NGL6 344 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 NEIL3Q8TAT5 605 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 PIK3R3Q92569 461 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 RMND5BQ96G75 393 aaPredicted RBP14.76□□□□□ -0.05
CD28-203ENST00000458610 VKORC1Q9BQB6 163 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 BTBD2Q9BX70 525 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 CXorf36Q9H7Y0 433 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 TINAGQ9UJW2 476 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 MEMO1Q9Y316 297 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 WIF1Q9Y5W5 379 aa14.76□□□□□ -0.05
CD28-203ENST00000458610 UQCRHLA0A096LP55 91 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 GXYLT2A0PJZ3 443 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 FIGNL2A6NMB9 653 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 ZNF195O14628 629 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 ATP8B1O43520 1251 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 FADS1O60427 444 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 AGR2O95994 175 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 ACP2P11117 423 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 HPGDP15428 266 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 ATP6V1C1P21283 382 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 UQCRC2P22695 453 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 PTPN6P29350 595 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 EVI2BP34910 448 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 PTGDSP41222 190 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 WNT3P56703 355 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 STX1BP61266 288 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 DUSP5Q16690 384 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.75□□□□□ -0.05
CD28-203ENST00000458610 SPANXN4Q5MJ08 99 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 FNDC7Q5VTL7 733 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 DESI1Q6ICB0 168 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 C6orf120Q7Z4R8 191 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 FGD2Q7Z6J4 655 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 FAM110BQ8TC76 370 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 PHF10Q8WUB8 498 aaKnown RBP14.75□□□□□ -0.05
CD28-203ENST00000458610 NUDT8Q8WV74 236 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 C16orf58Q96GQ5 468 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 PSMG3-AS1Q96PY0 264 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 OR52E6Q96RD3 313 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 YIPF4Q9BSR8 244 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 CCDC28BQ9BUN5 200 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 TBL1XR1Q9BZK7 514 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 HOXD1Q9GZZ0 328 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 UBQLN3Q9H347 655 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 PTGES2Q9H7Z7 377 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 GALNT9Q9HCQ5 603 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 SLCO1B3Q9NPD5 702 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 MED4Q9NPJ6 270 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 TCF7L2Q9NQB0 619 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 ZIM2Q9NZV7 527 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 PPP4R1LQ9P1A2 415 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 BTNL2Q9UIR0 455 aa14.75□□□□□ -0.05
CD28-203ENST00000458610 MRPS18CQ9Y3D5 142 aaKnown RBP14.75□□□□□ -0.05
CD28-203ENST00000458610 C2orf72A6NCS6 295 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms