RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 DUSP5Q16690 384 aa15.58■□□□□ 0.08
CCDC43-202ENST00000457422 TRIM16LQ309B1 348 aa15.58■□□□□ 0.08
CCDC43-202ENST00000457422 ZNF542PQ5EBM4 170 aa15.58■□□□□ 0.08
CCDC43-202ENST00000457422 SLC27A4Q6P1M0 643 aa15.58■□□□□ 0.08
CCDC43-202ENST00000457422 ZNF730Q6ZMV8 503 aa15.58■□□□□ 0.08
CCDC43-202ENST00000457422 GDPGP1Q6ZNW5 385 aa15.58■□□□□ 0.08
CCDC43-202ENST00000457422 PRICKLE2Q7Z3G6 844 aa15.58■□□□□ 0.08
CCDC43-202ENST00000457422 PEX5LQ8IYB4 626 aa15.58■□□□□ 0.08
CCDC43-202ENST00000457422 SLC34A3Q8N130 599 aa15.58■□□□□ 0.08
CCDC43-202ENST00000457422 PIGXQ8TBF5 258 aa15.58■□□□□ 0.08
CCDC43-202ENST00000457422 DOK4Q8TEW6 326 aa15.58■□□□□ 0.08
CCDC43-202ENST00000457422 SNRNP27Q8WVK2 155 aaKnown RBP15.58■□□□□ 0.08
CCDC43-202ENST00000457422 ACOT11Q8WXI4 607 aaPredicted RBP15.58■□□□□ 0.08
CCDC43-202ENST00000457422 ZNF582Q96NG8 517 aaPredicted RBP15.58■□□□□ 0.08
CCDC43-202ENST00000457422 GDF15Q99988 308 aa15.58■□□□□ 0.08
CCDC43-202ENST00000457422 PIGUQ9H490 435 aa15.58■□□□□ 0.08
CCDC43-202ENST00000457422 EGLN3Q9H6Z9 239 aa15.58■□□□□ 0.08
CCDC43-202ENST00000457422 GPR27Q9NS67 375 aa15.58■□□□□ 0.08
CCDC43-202ENST00000457422 DAPK2Q9UIK4 370 aa15.58■□□□□ 0.08
CCDC43-202ENST00000457422 NTNG1Q9Y2I2 539 aa15.58■□□□□ 0.08
CCDC43-202ENST00000457422 SPACA6W5XKT8 324 aa15.58■□□□□ 0.08
CCDC43-202ENST00000457422 AGAP5A6NIR3 686 aa15.57■□□□□ 0.08
CCDC43-202ENST00000457422 UBXN7O94888 489 aa15.57■□□□□ 0.08
CCDC43-202ENST00000457422 THBS1P07996 1170 aa15.57■□□□□ 0.08
CCDC43-202ENST00000457422 CKMT1AP12532 417 aa15.57■□□□□ 0.08
CCDC43-202ENST00000457422 GLULP15104 373 aa15.57■□□□□ 0.08
CCDC43-202ENST00000457422 DUSP8Q13202 625 aa15.57■□□□□ 0.08
CCDC43-202ENST00000457422 PLEKHM3Q6ZWE6 761 aa15.57■□□□□ 0.08
CCDC43-202ENST00000457422 TMEM163Q8TC26 289 aa15.57■□□□□ 0.08
CCDC43-202ENST00000457422 SLC37A2Q8TED4 501 aa15.57■□□□□ 0.08
CCDC43-202ENST00000457422 ZNF350Q9GZX5 532 aa15.57■□□□□ 0.08
CCDC43-202ENST00000457422 SAP130Q9H0E3 1048 aa15.57■□□□□ 0.08
CCDC43-202ENST00000457422 ZNF232Q9UNY5 417 aa15.57■□□□□ 0.08
CCDC43-202ENST00000457422 SATB2Q9UPW6 733 aa15.57■□□□□ 0.08
CCDC43-202ENST00000457422 CFL2Q9Y281 166 aa15.57■□□□□ 0.08
CCDC43-202ENST00000457422 KIAA0513O60268 411 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 PLOD3O60568 738 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 RAB36O95755 333 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 FPR3P25089 353 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 GAS1P54826 345 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 PPP1CAP62136 330 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 MLLT11Q13015 90 aaPredicted RBP15.56■□□□□ 0.08
CCDC43-202ENST00000457422 EIF2B5Q13144 721 aaKnown RBP15.56■□□□□ 0.08
CCDC43-202ENST00000457422 COL19A1Q14993 1142 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 LARS2Q15031 903 aaKnown RBP15.56■□□□□ 0.08
CCDC43-202ENST00000457422 SNAPC1Q16533 368 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 EIPR1Q53HC9 387 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 KIAA0895LQ68EN5 471 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 ZNF836Q6ZNA1 936 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 SNX29P2Q8IUI4 249 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 OR52I1Q8NGK6 324 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 OR8D4Q8NGM9 314 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 SDF2Q99470 211 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 MCHR1Q99705 422 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 PRRG3Q9BZD7 231 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 CACYBPQ9HB71 228 aaKnown RBP15.56■□□□□ 0.08
CCDC43-202ENST00000457422 HRASLS2Q9NWW9 162 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 IRGMA1A4Y4 181 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 CYR61O00622 381 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 PRODHO43272 600 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 KLF4O43474 513 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 GPX5O75715 221 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 THY1P04216 161 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 HBQ1P09105 142 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 RPS4Y1P22090 263 aaKnown RBP15.56■□□□□ 0.08
CCDC43-202ENST00000457422 STAT5AP42229 794 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 BCAP31P51572 246 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 EEF1A1P68104 462 aaKnown RBP15.56■□□□□ 0.08
CCDC43-202ENST00000457422 C1DQ13901 141 aaKnown RBP15.56■□□□□ 0.08
CCDC43-202ENST00000457422 KLHL22Q53GT1 634 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 TRMT12Q53H54 448 aaKnown RBP15.56■□□□□ 0.08
CCDC43-202ENST00000457422 PERM1Q5SV97 790 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 ZCCHC12Q6PEW1 402 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 SLC36A4Q6YBV0 504 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 RRM2BQ7LG56 351 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 GDF7Q7Z4P5 450 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 ZNF761Q86XN6 746 aaPredicted RBP15.56■□□□□ 0.08
CCDC43-202ENST00000457422 CYP4Z2PQ8N1L4 340 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 TMEM52Q8NDY8 209 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 SLC41A3Q96GZ6 507 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 FAM46AQ96IP4 442 aaKnown RBP15.56■□□□□ 0.08
CCDC43-202ENST00000457422 POLR2J2Q9GZM3 115 aaKnown RBP15.56■□□□□ 0.08
CCDC43-202ENST00000457422 C6orf62Q9GZU0 229 aaPredicted RBP15.56■□□□□ 0.08
CCDC43-202ENST00000457422 DUSP22Q9NRW4 184 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 CNIH4Q9P003 139 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 CYP8B1Q9UNU6 501 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 EYSQ5T1H1 3165 aa15.56■□□□□ 0.08
CCDC43-202ENST00000457422 SCN2AQ99250 2005 aa15.55■□□□□ 0.08
CCDC43-202ENST00000457422 SPTY2D1-AS1A0A0U1RR47 76 aa15.55■□□□□ 0.08
CCDC43-202ENST00000457422 SAGE2PA6NJ88 616 aa15.55■□□□□ 0.08
CCDC43-202ENST00000457422 SNTNA6NMZ2 147 aa15.55■□□□□ 0.08
CCDC43-202ENST00000457422 MYL12BO14950 172 aa15.55■□□□□ 0.08
CCDC43-202ENST00000457422 FGF17O60258 216 aa15.55■□□□□ 0.08
CCDC43-202ENST00000457422 GALR3O60755 368 aaPredicted RBP15.55■□□□□ 0.08
CCDC43-202ENST00000457422 LDB3O75112 727 aa15.55■□□□□ 0.08
CCDC43-202ENST00000457422 GPR75O95800 540 aa15.55■□□□□ 0.08
CCDC43-202ENST00000457422 HNRNPCP07910 306 aaKnown RBP eCLIP15.55■□□□□ 0.08
CCDC43-202ENST00000457422 TGM1P22735 817 aa15.55■□□□□ 0.08
CCDC43-202ENST00000457422 PRKCDQ05655 676 aa15.55■□□□□ 0.08
CCDC43-202ENST00000457422 C3orf38Q5JPI3 329 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms